Detailed information NTG0854512

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: QRA03_RS10605
• Genome accession: NZ_CP129604
• Coordinates: 1928358..1929707 (-)
• Length: 449 a.a.
• NCBI ID: WP_000900493.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain PUMB_17
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1923358..1934707

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRA03_RS10585 (QRA03_10590)	secA	1923684..1926191 (-)	2508	WP_000579382.1	preprotein translocase subunit SecA	-
QRA03_RS10590 (QRA03_10595)	raiA	1926467..1927009 (-)	543	WP_000671191.1	ribosome-associated translation inhibitor RaiA	-
QRA03_RS10595 (QRA03_10600)	cspC	1927330..1927527 (-)	198	WP_001162041.1	cold shock protein CspC	-
QRA03_RS10600 (QRA03_10605)	-	1927654..1928358 (-)	705	WP_002028884.1	ComF family protein	-
QRA03_RS10605 (QRA03_10610)	comFA	1928358..1929707 (-)	1350	WP_000900493.1	ATP-dependent helicase ComFA	Machinery gene
QRA03_RS10610 (QRA03_10615)	-	1929834..1931279 (-)	1446	WP_000499502.1	C40 family peptidase	-
QRA03_RS10615 (QRA03_10620)	-	1931427..1931741 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
QRA03_RS10620 (QRA03_10625)	-	1931915..1932757 (-)	843	WP_000844764.1	DegV family protein	-
QRA03_RS10625 (QRA03_10630)	-	1932997..1933632 (+)	636	WP_000926695.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51011.49 Da
• Isoelectric Point: 9.7406

>NTDB_id=854512 QRA03_RS10605 WP_000900493.1 1928358..1929707(-) (comFA) [Bacillus paranthracis strain PUMB_17]
MLGGKQLLLEELSSDLRRELSDLKKRGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECAVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRKGKQKGVIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=854512 QRA03_RS10605 WP_000900493.1 1928358..1929707(-) (comFA) [Bacillus paranthracis strain PUMB_17]
ATGCTTGGTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAGGGG
AGAGGTTGTATGTGTACAAGGTATAACGAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAATGGAAGCGTAATTTCAGAAAGGGGAAACAAAA
AGGTGTTATTGTGTCAGGACGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (110-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361