Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   QYT31_RS08210 Genome accession   NZ_CP129558
Coordinates   1600434..1601321 (-) Length   295 a.a.
NCBI ID   WP_000143426.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 670M     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1595434..1606321
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYT31_RS08180 (QYT31_08175) - 1595452..1595544 (+) 93 WP_010956583.1 hypothetical protein -
  QYT31_RS08185 (QYT31_08180) - 1595652..1596149 (-) 498 WP_001065268.1 glutathione peroxidase -
  QYT31_RS08190 (QYT31_08185) - 1596159..1596419 (-) 261 WP_001791974.1 hypothetical protein -
  QYT31_RS08195 (QYT31_08190) - 1596801..1596914 (-) 114 WP_011447078.1 hypothetical protein -
  QYT31_RS08200 (QYT31_08195) - 1597573..1599573 (-) 2001 WP_000776751.1 ABC transporter permease -
  QYT31_RS08205 (QYT31_08200) - 1599570..1600325 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  QYT31_RS08210 (QYT31_08205) braS 1600434..1601321 (-) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  QYT31_RS08215 (QYT31_08210) braR 1601332..1601997 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  QYT31_RS08220 (QYT31_08215) - 1602023..1602223 (-) 201 WP_000604727.1 hypothetical protein -
  QYT31_RS08225 (QYT31_08220) - 1602421..1603845 (+) 1425 WP_000953744.1 alkaline phosphatase -
  QYT31_RS08230 - 1603905..1604006 (-) 102 WP_000731972.1 SE2200 family small protein -
  QYT31_RS08235 (QYT31_08230) - 1604128..1604583 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  QYT31_RS08240 (QYT31_08235) - 1604828..1605589 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34032.32 Da        Isoelectric Point: 5.8962

>NTDB_id=854392 QYT31_RS08210 WP_000143426.1 1600434..1601321(-) (braS) [Staphylococcus aureus strain 670M]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=854392 QYT31_RS08210 WP_000143426.1 1600434..1601321(-) (braS) [Staphylococcus aureus strain 670M]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTGTTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.661

100

0.997