Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BVAD3_RS11860 Genome accession   NZ_AP024501
Coordinates   2488906..2489706 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain AD-3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2483906..2494706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVAD3_RS11830 (BVAD3_23510) - 2484447..2485112 (+) 666 WP_207168992.1 helix-turn-helix domain-containing protein -
  BVAD3_RS11835 - 2485377..2485514 (+) 138 WP_014470646.1 hypothetical protein -
  BVAD3_RS11840 (BVAD3_23520) - 2485608..2486726 (+) 1119 WP_029973892.1 NADH-dependent flavin oxidoreductase -
  BVAD3_RS11845 (BVAD3_23530) - 2486852..2487064 (+) 213 WP_029973891.1 spore germination protein -
  BVAD3_RS11850 (BVAD3_23540) - 2487190..2487402 (+) 213 WP_014418351.1 spore germination protein -
  BVAD3_RS11855 (BVAD3_23550) alr 2487577..2488758 (+) 1182 WP_021494302.1 alanine racemase -
  BVAD3_RS11860 (BVAD3_23560) spo0A 2488906..2489706 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  BVAD3_RS11865 (BVAD3_23570) spoIVB 2489987..2491267 (-) 1281 WP_038461527.1 SpoIVB peptidase -
  BVAD3_RS11870 recN 2491431..2493160 (-) 1730 Protein_2314 DNA repair protein RecN -
  BVAD3_RS11875 (BVAD3_23600) argR 2493192..2493641 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  BVAD3_RS11880 (BVAD3_23610) - 2493738..2494583 (-) 846 WP_003153172.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=85433 BVAD3_RS11860 WP_003153177.1 2488906..2489706(-) (spo0A) [Bacillus velezensis strain AD-3]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=85433 BVAD3_RS11860 WP_003153177.1 2488906..2489706(-) (spo0A) [Bacillus velezensis strain AD-3]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCTGATGTACTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGATGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment