Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BVAD3_RS07155 Genome accession   NZ_AP024501
Coordinates   1393645..1394109 (-) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis strain AD-3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1388645..1399109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVAD3_RS07135 (BVAD3_13760) - 1389126..1390946 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  BVAD3_RS07140 (BVAD3_13770) - 1390971..1392140 (-) 1170 WP_173613743.1 aminotransferase A -
  BVAD3_RS07145 (BVAD3_13780) - 1392341..1392502 (-) 162 WP_007409608.1 hypothetical protein -
  BVAD3_RS07150 (BVAD3_13790) cheV 1392691..1393602 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  BVAD3_RS07155 (BVAD3_13800) kre 1393645..1394109 (-) 465 WP_014417605.1 YkyB family protein Regulator
  BVAD3_RS07160 (BVAD3_13810) - 1394232..1395524 (-) 1293 WP_014417606.1 MFS transporter -
  BVAD3_RS07165 (BVAD3_13820) - 1395600..1396094 (-) 495 WP_089072484.1 L,D-transpeptidase family protein -
  BVAD3_RS07170 (BVAD3_13830) - 1396169..1397032 (-) 864 WP_173613744.1 metallophosphoesterase -
  BVAD3_RS07175 (BVAD3_13840) fadH 1397176..1397941 (+) 766 Protein_1368 2,4-dienoyl-CoA reductase -
  BVAD3_RS07180 - 1398052..1398600 (+) 549 Protein_1369 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=85424 BVAD3_RS07155 WP_014417605.1 1393645..1394109(-) (kre) [Bacillus velezensis strain AD-3]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=85424 BVAD3_RS07155 WP_014417605.1 1393645..1394109(-) (kre) [Bacillus velezensis strain AD-3]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTAACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment