Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QYM01_RS02250 Genome accession   NZ_CP129527
Coordinates   448239..448964 (+) Length   241 a.a.
NCBI ID   WP_043038646.1    Uniprot ID   A0A380JND7
Organism   Streptococcus equi subsp. zooepidemicus strain BJ-1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 443239..453964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYM01_RS02220 (QYM01_02220) tsaE 443779..444222 (+) 444 WP_021320420.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QYM01_RS02225 (QYM01_02225) - 444215..444742 (+) 528 WP_301900150.1 GNAT family N-acetyltransferase -
  QYM01_RS02230 (QYM01_02230) - 444743..446005 (+) 1263 WP_043029408.1 LCP family protein -
  QYM01_RS02235 (QYM01_02235) - 446170..446472 (-) 303 WP_014622379.1 hypothetical protein -
  QYM01_RS02240 (QYM01_02240) - 446469..446888 (-) 420 WP_012515079.1 HIT family protein -
  QYM01_RS02245 (QYM01_02245) - 447345..447698 (-) 354 WP_115250644.1 hypothetical protein -
  QYM01_RS02250 (QYM01_02250) pptA 448239..448964 (+) 726 WP_043038646.1 ABC transporter ATP-binding protein Regulator
  QYM01_RS02255 (QYM01_02255) - 448968..450002 (+) 1035 WP_301900154.1 ABC transporter permease -
  QYM01_RS02260 (QYM01_02260) ccrZ 450065..450856 (+) 792 WP_012515084.1 cell cycle regulator CcrZ -
  QYM01_RS02265 (QYM01_02265) trmB 450856..451491 (+) 636 WP_111677797.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QYM01_RS02275 (QYM01_02275) - 452107..452622 (-) 516 WP_021320424.1 hypothetical protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26636.91 Da        Isoelectric Point: 4.7723

>NTDB_id=853979 QYM01_RS02250 WP_043038646.1 448239..448964(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
MLNIENVTGGYLNIPVLKDISFSVANGELVGLIGLNGAGKSTTINEIIGFLKPYKGRISIDGLTLEEHEADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDLELAHRRAEPFLELFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKALEVEKAKGKSILMSTHVLDSAEKMCDRFVILHQGQVRAQGTLADLQAVFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=853979 QYM01_RS02250 WP_043038646.1 448239..448964(+) (pptA) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
ATGCTAAACATTGAGAATGTCACTGGAGGCTATCTTAATATTCCAGTTTTGAAGGATATTAGCTTTTCTGTTGCAAATGG
AGAGCTGGTAGGGCTTATTGGTCTAAATGGTGCTGGTAAGTCAACAACGATTAATGAAATTATTGGGTTTTTAAAGCCAT
ATAAAGGAAGGATTTCCATTGATGGCTTAACCTTGGAAGAGCATGAAGCTGATTATCGTAAGAAAATTGGCTTTATTCCA
GAAACACCAAGCTTATATGAGGAGCTGACCTTAGCAGAGCATATCAATACGGTGGCTATGGCCTATGATATTGATTTGGA
GCTGGCTCATCGGCGAGCTGAGCCCTTCTTAGAGCTGTTTCGCTTGACGGATAAGCTGGATTGGTTTCCGGTGCATTTTT
CTAAGGGAATGAAGCAAAAGGTTATGATTATTTGTGCTTTTGTCATTGATCCTAGTCTTTTTATTCTTGATGAGCCCTTT
TTGGGACTGGATCCTCTAGCTATTTCGGATTTGATCAAGGCTCTAGAGGTTGAAAAGGCAAAGGGCAAGTCAATTCTAAT
GAGTACCCATGTGCTGGATTCGGCAGAAAAAATGTGTGACCGTTTTGTGATATTGCATCAGGGGCAGGTGCGTGCGCAAG
GGACTCTGGCTGATTTGCAGGCAGTCTTTGGAGATGCTTCAGCTAGTCTTAATGACATTTACCTAGCACTGACAAAAGAG
GGTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380JND7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.895

99.17

0.743
  pptA Streptococcus thermophilus LMD-9

74.059

99.17

0.734