Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | QYM01_RS00750 | Genome accession | NZ_CP129527 |
| Coordinates | 126765..127718 (+) | Length | 317 a.a. |
| NCBI ID | WP_301899869.1 | Uniprot ID | - |
| Organism | Streptococcus equi subsp. zooepidemicus strain BJ-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 121765..132718
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QYM01_RS00710 (QYM01_00710) | - | 122235..122882 (+) | 648 | WP_301899868.1 | ATP-binding cassette domain-containing protein | - |
| QYM01_RS00715 (QYM01_00715) | comGA/cglA | 123063..124001 (+) | 939 | WP_206152300.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QYM01_RS00720 (QYM01_00720) | comYB | 123934..124968 (+) | 1035 | WP_301900724.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| QYM01_RS00725 (QYM01_00725) | comGC/cglC | 124969..125292 (+) | 324 | WP_014622142.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QYM01_RS00730 (QYM01_00730) | comGD | 125270..125695 (+) | 426 | WP_012514783.1 | competence type IV pilus minor pilin ComGD | - |
| QYM01_RS00735 (QYM01_00735) | comGE | 125652..125942 (+) | 291 | WP_014622143.1 | competence type IV pilus minor pilin ComGE | - |
| QYM01_RS00740 (QYM01_00740) | comYF | 125929..126363 (+) | 435 | WP_012677237.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| QYM01_RS00745 (QYM01_00745) | comGG | 126341..126703 (+) | 363 | WP_012514785.1 | competence type IV pilus minor pilin ComGG | - |
| QYM01_RS00750 (QYM01_00750) | comYH | 126765..127718 (+) | 954 | WP_301899869.1 | class I SAM-dependent methyltransferase | Machinery gene |
| QYM01_RS00755 (QYM01_00755) | - | 127778..128977 (+) | 1200 | WP_012678817.1 | acetate kinase | - |
| QYM01_RS00760 (QYM01_00760) | - | 129588..129770 (-) | 183 | WP_206158901.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| QYM01_RS00765 (QYM01_00765) | - | 129788..130039 (-) | 252 | WP_206158902.1 | bacteriocin class II family protein | - |
| QYM01_RS00770 (QYM01_00770) | - | 130554..132596 (+) | 2043 | WP_301899870.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35672.63 Da Isoelectric Point: 4.7613
>NTDB_id=853971 QYM01_RS00750 WP_301899869.1 126765..127718(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPISDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPISDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=853971 QYM01_RS00750 WP_301899869.1 126765..127718(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCTAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGGAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCCGCTAGTATTGCTGAAATCATGGGGTCATCA
GCTCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGTG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATTTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCTAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGGAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCCGCTAGTATTGCTGAAATCATGGGGTCATCA
GCTCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAGGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGTG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
62.658 |
99.685 |
0.625 |
| comYH | Streptococcus mutans UA140 |
62.658 |
99.685 |
0.625 |