Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6U68_RS02785 Genome accession   NZ_CP145866
Coordinates   552359..554146 (+) Length   595 a.a.
NCBI ID   WP_410531882.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS9     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 547359..559146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS02760 (V6U68_02755) - 547460..548137 (+) 678 WP_410531877.1 transposase -
  V6U68_RS02765 (V6U68_02760) - 548134..549099 (+) 966 WP_410531878.1 IS3 family transposase -
  V6U68_RS02770 (V6U68_02765) tnpA 549298..549762 (+) 465 WP_410531879.1 IS200/IS605 family transposase -
  V6U68_RS02775 (V6U68_02770) - 550135..550392 (+) 258 WP_021152202.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
  V6U68_RS02780 (V6U68_02775) rcrP 550610..552346 (+) 1737 WP_410531881.1 ABC transporter ATP-binding protein Regulator
  V6U68_RS02785 (V6U68_02780) rcrQ 552359..554146 (+) 1788 WP_410531882.1 ABC transporter ATP-binding protein Regulator
  V6U68_RS02790 (V6U68_02785) queA 554243..555286 (-) 1044 WP_175064740.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6U68_RS02795 (V6U68_02790) - 555440..556141 (+) 702 WP_410531883.1 glucosamine-6-phosphate deaminase -
  V6U68_RS02800 (V6U68_02795) - 556331..557314 (+) 984 WP_021152191.1 rhodanese-related sulfurtransferase -
  V6U68_RS02805 (V6U68_02800) - 557493..557690 (+) 198 WP_004182985.1 helix-turn-helix transcriptional regulator -
  V6U68_RS02810 (V6U68_02805) - 557704..558198 (+) 495 WP_183135723.1 DUF6773 family protein -
  V6U68_RS02815 (V6U68_02810) - 558277..559047 (+) 771 WP_410531885.1 nucleoside phosphorylase -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66719.75 Da        Isoelectric Point: 5.1474

>NTDB_id=853827 V6U68_RS02785 WP_410531882.1 552359..554146(+) (rcrQ) [Streptococcus salivarius strain KSS9]
MKNNKKKTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLDIMKGVEGAHINVYYVGWV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQIV
NAVFTLALVIGTVFYLNLQLGAVVVITIPITYFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=853827 V6U68_RS02785 WP_410531882.1 552359..554146(+) (rcrQ) [Streptococcus salivarius strain KSS9]
ATGAAGAATAATAAAAAGAAAACAAATCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CAGAGTTGACTAAAAATACGCTGGACATTATGAAGGGTGTCGAAGGCGCTCATATTAACGTTTACTATGTTGGTTGGGTT
CTAGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCTTATTATTCCAACTATTTTATGACCAATGCCGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGACCTCTTGGGCCGCTTTACTAGTGATGTCGAGACAGTATCTAATGCCTTGCAGCAATCATTCTTGCAGATTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGGACAGTGTTTTACCTTAATCTTCAGTTGGGAGCTGTGGTTGTCATCAC
TATTCCGATTACTTACTTTGGCGCTCGCTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAGATCCTTG
GACGACTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTCATTTCAGGACTTATGATGCCGGT
TCTTAATGGTTTATCTGACTTGACCTATCTAATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCCTAACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAAAGTGCTAAATCTTCTTTAGATCGTATTTTCCAACTGATGGATGAACCAGATGAGGCTAATGATGCTACTGAGGT
GCTTGAAGGAGATTTGACTGGGCAAGTTAGCTTTAAGCATGTGGATTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGAGAAATGGTAGCCATTGTTGGTCCAACCGGTGCCGGAAAATCAACGATTATCAAC
CTTCTCATGCGTTTCTATGATGTGACTGCCGGGTCTATCTCGGTTGACGGTCATGATATCCGTAACCTGTCTCGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAGGAAATTGTTGAAGCTGCTAAGGCGGCCAATGTGGATCACTTTATCCGTACACTACCTGGT
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCGACCTCATCGGTTGATACCCGTCTGGAACTCCTGATTCAAAAAG
CCATGAAGACCCTTATGCAAGGTAGAACAAGCTTTGTCATTGCCCACCGTCTATCGACTATTCAAGAAGCAGACAAAATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGCCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.333

100

0.427