Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   V6U68_RS02275 Genome accession   NZ_CP145866
Coordinates   440671..441516 (+) Length   281 a.a.
NCBI ID   WP_410531827.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS9     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 435671..446516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U68_RS02255 (V6U68_02250) - 436389..437072 (+) 684 WP_070654839.1 response regulator transcription factor -
  V6U68_RS02260 (V6U68_02255) - 437057..438154 (+) 1098 WP_110981047.1 sensor histidine kinase -
  V6U68_RS02265 (V6U68_02260) - 438369..439255 (-) 887 Protein_398 IS30 family transposase -
  V6U68_RS02270 (V6U68_02265) comE/blpR 439466..440200 (+) 735 WP_247925074.1 response regulator transcription factor Regulator
  V6U68_RS02275 (V6U68_02270) comD/blpH 440671..441516 (+) 846 WP_410531827.1 sensor histidine kinase Regulator
  V6U68_RS02280 (V6U68_02275) - 441614..442267 (+) 654 WP_247925076.1 DUF6287 domain-containing protein -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 31891.76 Da        Isoelectric Point: 5.0503

>NTDB_id=853820 V6U68_RS02275 WP_410531827.1 440671..441516(+) (comD/blpH) [Streptococcus salivarius strain KSS9]
MVDISMFAYFMVLQFLIIFGQNNQGRRDWIVYLVVTYALLFLATLVYINATFSQRLKEEVLLQKDRQISDLANYSQQIEQ
LYTDLRRFRHDYLNVLSSIKYGIDSKDMAIISDIYDNILEKTKTRIEGKQYEIANLINIKDEAVKGVLASKILEAQGQSI
TIHLEVSDVFEVSRMELLDFITVLSIFLDNAIEASLDSSAKEVNIALISGETKVVIVENTIAQESINTVGIFKLGRSSKG
EGRGIGLSTVREILGKYPNCSLSTQSKDYRFKQTLKIEDVV

Nucleotide


Download         Length: 846 bp        

>NTDB_id=853820 V6U68_RS02275 WP_410531827.1 440671..441516(+) (comD/blpH) [Streptococcus salivarius strain KSS9]
ATGGTTGATATTTCGATGTTTGCTTATTTTATGGTTCTTCAATTCTTAATTATTTTTGGGCAGAATAATCAAGGGAGAAG
GGATTGGATTGTTTATCTCGTGGTGACCTATGCTTTACTCTTTCTTGCGACCCTTGTTTACATTAATGCGACTTTCAGCC
AAAGACTAAAAGAAGAAGTCCTTCTCCAAAAAGATAGGCAAATTAGTGATTTAGCCAACTATAGCCAACAAATCGAGCAA
CTCTATACGGATCTTCGTCGATTTAGGCATGATTACCTAAATGTCTTGTCTAGTATCAAATATGGCATTGACTCCAAGGA
TATGGCTATTATTTCCGATATCTACGATAACATACTTGAAAAAACAAAGACTCGGATTGAGGGGAAACAGTACGAAATTG
CCAACTTGATTAATATTAAAGATGAAGCCGTTAAAGGTGTCCTGGCTAGTAAAATTTTGGAAGCACAGGGACAGTCTATT
ACCATTCACCTTGAGGTCAGCGACGTCTTTGAAGTATCAAGGATGGAATTGTTGGATTTCATAACAGTGTTGTCTATTTT
TTTGGATAATGCTATTGAAGCTAGTCTGGATAGCAGTGCTAAAGAAGTAAACATTGCTCTTATCAGCGGAGAGACAAAGG
TAGTAATAGTGGAGAATACCATCGCTCAAGAATCTATCAATACAGTCGGTATCTTTAAACTTGGTCGCTCAAGTAAAGGA
GAAGGACGTGGTATAGGTTTGTCTACTGTTCGAGAGATTTTAGGGAAGTACCCTAATTGTTCTTTGTCAACACAATCTAA
AGACTATCGATTTAAACAGACACTAAAAATAGAAGATGTGGTTTGA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(175-277)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

42.294

99.288

0.42