Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   R2TS_RS07525 Genome accession   NZ_AP024498
Coordinates   1602073..1602699 (+) Length   208 a.a.
NCBI ID   WP_182071691.1    Uniprot ID   -
Organism   Enterobacter asburiae strain En30     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1597073..1607699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R2TS_RS07505 (R2TS_14620) - 1597473..1599233 (-) 1761 WP_182071692.1 Lon protease family protein -
  R2TS_RS07510 (R2TS_14630) matP 1599420..1599872 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  R2TS_RS07515 (R2TS_14640) ompA 1599936..1600991 (-) 1056 WP_023311028.1 porin OmpA -
  R2TS_RS07520 (R2TS_14650) sulA 1601346..1601855 (-) 510 WP_207168183.1 SOS-induced cell division inhibitor SulA -
  R2TS_RS07525 (R2TS_14660) sxy/tfoX 1602073..1602699 (+) 627 WP_182071691.1 TfoX/Sxy family DNA transformation protein Regulator
  R2TS_RS07530 (R2TS_14670) yccS 1602656..1604818 (-) 2163 WP_033145122.1 YccS family putative transporter -
  R2TS_RS07535 (R2TS_14680) - 1604838..1605284 (-) 447 WP_023311032.1 YccF domain-containing protein -
  R2TS_RS07540 (R2TS_14690) helD 1605408..1607462 (+) 2055 WP_182071690.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23877.42 Da        Isoelectric Point: 9.2151

>NTDB_id=85378 R2TS_RS07525 WP_182071691.1 1602073..1602699(+) (sxy/tfoX) [Enterobacter asburiae strain En30]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITDEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=85378 R2TS_RS07525 WP_182071691.1 1602073..1602699(+) (sxy/tfoX) [Enterobacter asburiae strain En30]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AAGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGCTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATTACCGATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAAGTTCTCTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGTAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.621

97.596

0.572

Multiple sequence alignment