Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   V6U67_RS04700 Genome accession   NZ_CP145865
Coordinates   960725..961207 (+) Length   160 a.a.
NCBI ID   WP_037597740.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS8     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 955725..966207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS04680 (V6U67_04680) queG 956599..957717 (+) 1119 WP_272125877.1 tRNA epoxyqueuosine(34) reductase QueG -
  V6U67_RS04685 (V6U67_04685) prfB 957770..958868 (+) 1099 WP_096833329.1 peptide chain release factor 2 -
  V6U67_RS04690 (V6U67_04690) ftsE 958956..959648 (+) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  V6U67_RS04695 (V6U67_04695) ftsX 959641..960570 (+) 930 WP_003092823.1 permease-like cell division protein FtsX -
  V6U67_RS04700 (V6U67_04700) mutX 960725..961207 (+) 483 WP_037597740.1 NUDIX hydrolase Machinery gene
  V6U67_RS04705 (V6U67_04705) - 961217..962395 (+) 1179 WP_104020933.1 AI-2E family transporter -
  V6U67_RS04710 (V6U67_04710) - 962385..963614 (+) 1230 WP_270281382.1 tetratricopeptide repeat protein -
  V6U67_RS04715 (V6U67_04715) lepB 963736..964293 (+) 558 WP_410531296.1 signal peptidase I -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18809.11 Da        Isoelectric Point: 4.4433

>NTDB_id=853727 V6U67_RS04700 WP_037597740.1 960725..961207(+) (mutX) [Streptococcus salivarius strain KSS8]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDRPFFSAKFSYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=853727 V6U67_RS04700 WP_037597740.1 960725..961207(+) (mutX) [Streptococcus salivarius strain KSS8]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTGGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTACACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAATCTCGTGAAGGAACGCT
TGAATGGGTACCATATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTATGAGATTTTTAAGTGGATCCTTGAAG
ATAGACCATTCTTCTCTGCAAAATTTAGCTACGATCGTAACCAGAACTTGGTAGATAAAACTGTAACATTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712