Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6U67_RS02645 Genome accession   NZ_CP145865
Coordinates   523883..525670 (+) Length   595 a.a.
NCBI ID   WP_272126092.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS8     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 518883..530670
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS02625 (V6U67_02630) - 519480..520688 (+) 1209 WP_037611752.1 ABC transporter permease -
  V6U67_RS02630 (V6U67_02635) rplJ 520979..521482 (+) 504 WP_004183007.1 50S ribosomal protein L10 -
  V6U67_RS02635 (V6U67_02640) rplL 521558..521926 (+) 369 WP_002886110.1 50S ribosomal protein L7/L12 -
  V6U67_RS02640 (V6U67_02645) rcrP 522134..523870 (+) 1737 WP_272126090.1 ABC transporter ATP-binding protein Regulator
  V6U67_RS02645 (V6U67_02650) rcrQ 523883..525670 (+) 1788 WP_272126092.1 ABC transporter ATP-binding protein Regulator
  V6U67_RS02650 (V6U67_02655) queA 525768..526811 (-) 1044 WP_272126094.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6U67_RS02655 (V6U67_02660) - 526962..527663 (+) 702 WP_272126096.1 glucosamine-6-phosphate deaminase -
  V6U67_RS02660 (V6U67_02665) - 527853..528836 (+) 984 WP_272126098.1 rhodanese-related sulfurtransferase -
  V6U67_RS02665 (V6U67_02670) - 528964..529161 (+) 198 WP_272126100.1 helix-turn-helix transcriptional regulator -
  V6U67_RS02670 (V6U67_02675) - 529175..529669 (+) 495 WP_272126102.1 DUF6773 family protein -
  V6U67_RS02675 (V6U67_02680) - 529748..530518 (+) 771 WP_270327648.1 nucleoside phosphorylase -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66767.89 Da        Isoelectric Point: 5.1474

>NTDB_id=853710 V6U67_RS02645 WP_272126092.1 523883..525670(+) (rcrQ) [Streptococcus salivarius strain KSS8]
MKKNKMKTSHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLDIMKGVEGAHINVYYVGWV
LVIYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARYIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVTDKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEATKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKALMQGRTSFVIAHRLSTIQEADKI
LFLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=853710 V6U67_RS02645 WP_272126092.1 523883..525670(+) (rcrQ) [Streptococcus salivarius strain KSS8]
ATGAAGAAAAATAAAATGAAAACAAGTCATTCCTCAAGTTTTGGCCGCCTTTGGTCCTACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CAGAGCTGACCAAAAATACGCTGGATATCATGAAGGGTGTCGAAGGCGCTCATATTAACGTTTACTATGTTGGTTGGGTT
CTAGTTATTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCCGCCTACTATTCCAACTATTTCATGACCAATGCTGTGCA
AGCAACAGTTCAAGATATGCGAAATGAGATGACTGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGTGACCTCTTGGGACGCTTTACCAGTGACGTCGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGGTTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTACTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACATTCTTTGGTGCCCGCTATATCATGAGTAAGTCTCAGCCCTACTTTAAACAGCAGGCTGATGCCCTGG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAGATCCTTG
GATGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGTTTTAAGGCTAATTTCATTTCAGGACTCATGATGCCTGT
TCTTAACGGTTTATCTGACTTGACCTATCTAATTGTCGCTGTTTTGGGTGGTTTGCAAGTCTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAACCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTACAGAGTGCTAAATCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTAGAGGGAGATTTAACTGGCCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGACTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGCGAAATGGTAGCCATTGTCGGTCCTACCGGTGCCGGAAAATCAACCATTATCAAC
CTCCTCATGCGTTTCTATGATGTGACTGCTGGTTCTATTTCGGTTGACGGTCATGATATCCGTAACCTGTCTCGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAAGAAATTGTTGAAGCCACTAAGGCAGCCAATGTGGACCACTTTATCCGTACACTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGATGAAGCAACCTCATCGGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CTATGAAGGCCCTCATGCAAGGTCGAACAAGCTTTGTCATTGCCCACCGTCTGTCAACTATCCAAGAAGCAGACAAAATT
TTGTTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGTCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.892

99.496

0.417