Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   V6U67_RS02435 Genome accession   NZ_CP145865
Coordinates   479632..480438 (+) Length   268 a.a.
NCBI ID   WP_022496583.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS8     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 474632..485438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U67_RS02410 (V6U67_02415) tpiA 474783..475541 (+) 759 WP_002885895.1 triose-phosphate isomerase -
  V6U67_RS02415 (V6U67_02420) recP/tkt 475845..477830 (+) 1986 WP_022496580.1 transketolase Machinery gene
  V6U67_RS02425 (V6U67_02430) tmk 478122..478751 (+) 630 WP_022496581.1 dTMP kinase -
  V6U67_RS02430 (V6U67_02435) - 478760..479635 (+) 876 WP_022496582.1 DNA polymerase III subunit delta' -
  V6U67_RS02435 (V6U67_02440) yaaT 479632..480438 (+) 807 WP_022496583.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  V6U67_RS02440 (V6U67_02445) yabA 480425..480745 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  V6U67_RS02445 (V6U67_02450) rsmI 480748..481614 (+) 867 WP_022496584.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  V6U67_RS02450 (V6U67_02455) - 481751..482988 (+) 1238 Protein_434 ammonium transporter -
  V6U67_RS02455 (V6U67_02460) - 482999..483340 (+) 342 WP_002886165.1 P-II family nitrogen regulator -
  V6U67_RS02460 (V6U67_02465) - 483431..484087 (+) 657 WP_022496587.1 glucosaminidase domain-containing protein -
  V6U67_RS02465 (V6U67_02470) - 484105..484926 (+) 822 WP_022496588.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29885.39 Da        Isoelectric Point: 4.6550

>NTDB_id=853708 V6U67_RS02435 WP_022496583.1 479632..480438(+) (yaaT) [Streptococcus salivarius strain KSS8]
MTEVIGIKFEETGTIEYVVPDRNYAKDDFVVVLEKKDKRLAQVVMENTDFPELSLPADLNRVEGLAGEKDFARYEENLLK
AEKSMGVVADLIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRESKASYPDLGDEIETKDGMGQVVAIDVI
AGTIKVVFEKGRAPLIYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=853708 V6U67_RS02435 WP_022496583.1 479632..480438(+) (yaaT) [Streptococcus salivarius strain KSS8]
ATGACTGAAGTCATTGGAATAAAATTTGAAGAAACTGGTACAATAGAATATGTTGTACCTGATAGAAATTATGCCAAAGA
TGACTTTGTGGTCGTTTTGGAGAAAAAAGATAAACGCCTAGCTCAGGTTGTCATGGAAAACACAGATTTTCCTGAGCTTA
GTTTGCCTGCGGATTTGAATCGGGTTGAAGGATTGGCAGGAGAGAAAGATTTTGCTAGATATGAGGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
GCTAAATAACTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTGCTCAAAGATTTGGCAT
CTTACTTTAAGACACGCATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAGATTTATGGTGGTTTAGGACCTTGT
GGACGTGCACTTTGTTGTTCTAGCTTTTTGGGTGAATTTCCACCGGTGTCGATTAAGATGGCTAAAAATCAGAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGCCGACTCATGTGCTGTCTCAGTTATGAAGATGATTTTTACAGAGAAA
GCAAGGCTAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCATGGGTCAAGTTGTTGCCATTGATGTGATC
GCAGGGACTATTAAGGTTGTGTTTGAAAAAGGGCGTGCGCCCCTAATTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

43.346

98.134

0.425