Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   J3989_RS10145 Genome accession   NZ_AP024489
Coordinates   2051937..2053979 (-) Length   680 a.a.
NCBI ID   WP_079876996.1    Uniprot ID   -
Organism   Neisseria meningitidis strain NIID777     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2046937..2058979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J3989_RS10120 (NMNIID777_18980) - 2047348..2047608 (-) 261 WP_002219771.1 hypothetical protein -
  J3989_RS10945 - 2047813..2048019 (-) 207 WP_002244292.1 hypothetical protein -
  J3989_RS10125 (NMNIID777_19000) - 2048028..2049182 (-) 1155 WP_002219773.1 cupin domain-containing protein -
  J3989_RS10130 (NMNIID777_19010) - 2049549..2049830 (+) 282 WP_002221438.1 hypothetical protein -
  J3989_RS10135 (NMNIID777_19020) argC 2049827..2050870 (+) 1044 WP_080610877.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  J3989_RS10140 - 2051021..2051137 (-) 117 Protein_1978 IS5/IS1182 family transposase -
  J3989_RS10145 (NMNIID777_19030) recG 2051937..2053979 (-) 2043 WP_079876996.1 ATP-dependent DNA helicase RecG Machinery gene
  J3989_RS10150 (NMNIID777_19040) secB 2054065..2054508 (-) 444 WP_002214461.1 protein-export chaperone SecB -
  J3989_RS10155 (NMNIID777_19050) grxC 2054529..2054786 (-) 258 WP_002221441.1 glutaredoxin 3 -
  J3989_RS10160 (NMNIID777_19060) rng 2054999..2056492 (+) 1494 WP_002214463.1 ribonuclease G -
  J3989_RS10165 (NMNIID777_19070) - 2056526..2057776 (-) 1251 WP_207177030.1 ATP-binding protein -
  J3989_RS10170 (NMNIID777_19080) - 2057772..2057947 (-) 176 Protein_1984 response regulator -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74871.97 Da        Isoelectric Point: 7.8829

>NTDB_id=85368 J3989_RS10145 WP_079876996.1 2051937..2053979(-) (recG) [Neisseria meningitidis strain NIID777]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQVREIAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=85368 J3989_RS10145 WP_079876996.1 2051937..2053979(-) (recG) [Neisseria meningitidis strain NIID777]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAACATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCCTGACCATCGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGTCGGGTCGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGTTGAAAGTGATTTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAATATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGCTTCGCCAAGCTTGAAGAA
GACTTACACCTTTTGGAACAAGTGCGCGAAATCGCCCCGATGCTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCACGATGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

99.559

100

0.996

Multiple sequence alignment