Detailed information    

insolico Bioinformatically predicted

Overview


Name   rexA   Type   Machinery gene
Locus tag   V6U66_RS09115 Genome accession   NZ_CP145864
Coordinates   1951669..1955322 (-) Length   1217 a.a.
NCBI ID   WP_155213972.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS7     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1946669..1960322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS09095 (V6U66_09085) proB 1947065..1947868 (-) 804 WP_014635008.1 glutamate 5-kinase -
  V6U66_RS09100 (V6U66_09090) - 1947988..1949577 (-) 1590 WP_138261775.1 ABC transporter permease -
  V6U66_RS09105 (V6U66_09095) - 1949580..1950311 (-) 732 WP_138261776.1 ABC transporter ATP-binding protein -
  V6U66_RS09110 (V6U66_09100) - 1950586..1951317 (+) 732 WP_221739278.1 DUF554 domain-containing protein -
  V6U66_RS09115 (V6U66_09105) rexA 1951669..1955322 (-) 3654 WP_155213972.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  V6U66_RS09120 (V6U66_09110) rexB 1955312..1958632 (-) 3321 WP_155213973.1 ATP-dependent nuclease subunit B Machinery gene
  V6U66_RS09125 (V6U66_09115) - 1958883..1960256 (-) 1374 WP_004183414.1 GHKL domain-containing protein -

Sequence


Protein


Download         Length: 1217 a.a.        Molecular weight: 138170.24 Da        Isoelectric Point: 4.6897

>NTDB_id=853650 V6U66_RS09115 WP_155213972.1 1951669..1955322(-) (rexA) [Streptococcus salivarius strain KSS7]
MLTKAFLSPTEIKERIAQEAASDKERKLTPEQIEAIYSNGSNILVSASAGSGKTFVMVERILDMIGRGVGIDQLFISTFT
VKAAGELKERLEKRLTEQLGQVETDEERAFLSDQIAKIGTADIGTMDAFTQKLVNQYGYLLGVSPIFRIMTDPAEQTLMK
NEVYADLFNDYMQGKDAQLFQKLVRNFAGNGKTSKAFRDLVYDVYNFSQATAGPEKWLRQNLLKGQAEANPEKAKAELLE
GLKDGLLADFLDFLRDHLGLAQREFAKAKYLNNVSDAISLLEGALANDQTDMEDLLKQLLTLSGGTGLTNMTRPKDEELK
AYKEAYNKTKNEFVAQLREIDTQLTVLEVLTKHNDDILPLLELLQAFVLDFSDQYLQAKIQENAFEFSDIAHFAIRILEE
NPEVAASYRDRYHEVMVDEYQDNSHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNGKFQLFLENPDAGKLILL
KENFRSQSEVLDATNGVFSHLMDQEIGDILYDKTHMLVAGSEKQKEPHPENETEVLIYNSDEASVTPDEESADQPISSGE
ISLVIKEIIKLHEQGVRFEDITLLAPTRNTYLDLMASFEEHGIPLVPDEYKSSYLESLEVMIMLDTLRAINNPLNDYALV
ALLRSPMFNFNEDDLARIAVQADKVQFYDKLLAAHTKSGLHPEVVTQGLEAKLTLFIETLSDWRDYSKWHSLYDLIWKIY
DDRFYYDYVGSLPRAEQRQANLYALALRANAYEKTGFKGLSRFIGMIDKIISSGNDLEEVTDLVPKNAVSLMTIHKSKGL
EFKYVFVLQMNRKFIGHSKDGLSGKYIINREKGLGIKYLADLKDQVNTNLPKLNVVLETLTFQENRREERRASISEEMRL
LYVAMTRAEKKLYLVGKGSKEKLTQQFGTDVENNRLPVALRDQIATYQDWVMALDTAFMRKDLKFTVRFVEAEDLTPEAI
GQVEVQAAVDADDLSNNRQTEDIKRALTVLESVEKLNQLYAPAIELPSVRTPSQLKAFYEPVMDTEGVDIMDKKEEVQPL
ETTTSFELPDFGQKTKVTGAAVGSATHELMQRLVLSDKVSLQDLTQALSRVSADDQVKARVQLEKLLGFFDTELGKLILA
NRDQLRREAPFAMLAEDPASKEDFVVRGIIDGYLLLEDRIVLFDYKTDRFTQPGELKERYKGQMSLYAKALSQAYQIDKI
DKYLILLGGKDLEVVEV

Nucleotide


Download         Length: 3654 bp        

>NTDB_id=853650 V6U66_RS09115 WP_155213972.1 1951669..1955322(-) (rexA) [Streptococcus salivarius strain KSS7]
ATGTTGACTAAAGCTTTTTTAAGTCCAACAGAGATTAAGGAACGCATTGCCCAAGAAGCAGCTTCTGACAAGGAACGCAA
GTTAACACCTGAGCAGATTGAGGCCATTTACAGTAATGGTAGCAATATTCTTGTGTCAGCTTCGGCTGGATCAGGAAAAA
CCTTTGTTATGGTTGAGCGTATCCTTGATATGATTGGACGTGGCGTTGGCATTGATCAACTCTTTATCTCAACCTTTACG
GTAAAGGCCGCGGGTGAGTTAAAAGAGCGTCTGGAAAAGCGTCTGACAGAGCAACTTGGACAAGTTGAGACGGATGAAGA
GCGTGCCTTTCTTTCAGATCAGATTGCCAAGATTGGAACGGCTGATATTGGAACTATGGATGCCTTTACCCAGAAATTGG
TCAATCAGTATGGCTATCTCCTGGGTGTGTCACCTATTTTCCGCATTATGACAGACCCTGCCGAGCAGACACTCATGAAA
AATGAGGTTTATGCTGATCTCTTTAACGATTATATGCAAGGAAAGGATGCCCAACTTTTCCAAAAATTGGTCCGCAACTT
CGCAGGAAATGGCAAGACTAGTAAGGCTTTTCGTGATTTAGTTTACGATGTCTATAACTTTTCTCAGGCTACTGCAGGTC
CTGAAAAATGGCTACGTCAAAATCTTTTAAAAGGGCAGGCAGAGGCCAATCCAGAAAAGGCTAAAGCTGAGCTTTTAGAG
GGTCTCAAAGATGGCTTGTTGGCTGATTTCTTAGACTTCTTAAGAGACCATCTAGGTCTAGCTCAGCGTGAATTTGCCAA
GGCCAAATATCTAAATAATGTGTCAGATGCCATTAGCCTTCTTGAAGGAGCCTTGGCTAATGACCAAACGGATATGGAGG
ACCTGCTCAAACAACTCTTGACTTTGTCAGGAGGGACTGGTTTGACCAATATGACCCGTCCTAAAGACGAGGAACTCAAG
GCCTACAAGGAAGCTTACAACAAGACCAAAAATGAGTTTGTGGCCCAGTTGCGAGAGATTGATACCCAACTAACGGTCCT
CGAGGTTTTGACCAAGCATAATGATGACATCCTACCTCTGTTGGAGTTGCTTCAGGCCTTTGTACTTGATTTTTCGGACC
AGTATTTACAGGCCAAGATTCAGGAAAATGCTTTTGAATTCTCGGATATTGCCCATTTTGCTATCCGTATTTTGGAGGAA
AATCCAGAGGTGGCAGCTAGCTACCGTGACCGTTACCATGAAGTAATGGTAGACGAGTATCAGGACAATAGCCATACCCA
AGAACGCATGTTGGAGCTCCTCTCTAACGGCCACAACCGATTCATGGTGGGAGATATCAAACAATCCATATATCGTTTCC
GTCAGGCGGATCCTCAGATTTTTAACGGCAAGTTTCAGCTCTTCCTTGAAAATCCAGATGCAGGTAAGTTGATTCTCCTT
AAAGAGAACTTCCGTAGCCAATCTGAGGTTCTTGATGCGACTAATGGTGTTTTCAGCCACCTCATGGACCAGGAAATCGG
AGATATCCTCTATGACAAGACGCATATGTTGGTAGCAGGTAGCGAGAAGCAAAAAGAACCCCATCCTGAAAATGAGACAG
AGGTTCTGATTTACAATAGTGATGAAGCGAGTGTAACTCCTGACGAGGAAAGTGCTGATCAACCTATTAGTAGCGGAGAG
ATTTCCTTGGTTATCAAAGAAATCATCAAACTTCACGAGCAGGGTGTACGTTTTGAGGACATTACCCTCCTAGCACCAAC
CCGCAACACCTATCTGGACTTGATGGCAAGCTTTGAGGAGCACGGAATTCCCTTGGTTCCTGACGAGTACAAGTCAAGCT
ACCTAGAGTCACTAGAAGTTATGATTATGTTGGATACCCTTCGTGCCATCAATAATCCTCTCAATGACTACGCCTTGGTT
GCCCTCCTTCGTTCACCTATGTTTAACTTCAACGAGGACGATTTGGCTCGGATTGCTGTTCAGGCTGACAAAGTGCAATT
CTATGACAAGCTTCTTGCAGCTCATACTAAATCAGGACTTCATCCAGAAGTCGTGACGCAAGGACTGGAGGCAAAGTTGA
CTCTCTTCATTGAGACTCTGTCAGATTGGCGTGATTACAGTAAGTGGCACTCGCTTTACGACCTCATTTGGAAGATTTAC
GACGATCGTTTCTATTATGATTATGTTGGCAGTCTTCCACGAGCTGAGCAACGTCAGGCCAATCTCTACGCCCTTGCCTT
GCGTGCCAATGCCTATGAAAAGACTGGCTTTAAGGGACTTTCCCGTTTTATTGGCATGATTGATAAGATCATTTCTAGCG
GTAACGACCTAGAGGAAGTGACAGACTTGGTTCCCAAAAATGCAGTTAGCCTTATGACTATTCACAAGTCCAAGGGACTA
GAGTTCAAGTATGTCTTTGTCTTGCAGATGAATCGCAAGTTCATTGGTCACAGCAAGGACGGACTGAGTGGTAAGTACAT
TATCAACCGTGAAAAAGGACTTGGCATTAAGTACCTAGCTGACCTCAAAGACCAGGTAAACACCAATTTGCCTAAGTTAA
ATGTTGTTCTCGAGACCTTAACCTTCCAGGAAAATCGTAGGGAAGAGCGTCGAGCAAGTATCTCAGAAGAGATGCGTTTG
CTCTATGTTGCAATGACCCGTGCAGAGAAAAAACTCTACCTAGTTGGTAAGGGCAGTAAGGAGAAATTGACCCAGCAATT
TGGCACGGATGTTGAAAATAATCGCCTACCAGTAGCTCTACGTGACCAAATCGCTACTTATCAGGATTGGGTTATGGCTT
TGGATACTGCCTTTATGAGAAAGGATCTCAAGTTTACTGTTCGCTTTGTAGAGGCTGAGGACTTGACTCCAGAGGCTATT
GGTCAGGTTGAAGTTCAAGCGGCAGTAGATGCTGATGATCTCTCTAACAATCGCCAGACGGAAGACATTAAGCGTGCCCT
AACTGTCTTAGAAAGTGTTGAAAAACTCAATCAACTTTATGCACCAGCGATTGAACTTCCATCTGTGCGTACGCCGAGCC
AGCTCAAAGCCTTCTACGAACCTGTCATGGATACCGAAGGGGTGGATATTATGGACAAGAAAGAGGAGGTGCAACCTCTT
GAGACTACCACTAGCTTTGAGCTTCCAGATTTTGGGCAAAAAACGAAGGTCACTGGAGCTGCAGTTGGTTCAGCCACCCA
TGAACTCATGCAACGCTTGGTTCTTTCTGACAAGGTGAGCCTCCAAGATTTGACACAGGCCTTGAGTCGGGTATCCGCAG
ATGATCAAGTCAAGGCGCGTGTGCAGTTAGAAAAACTTTTAGGCTTCTTTGACACCGAACTTGGGAAGCTCATTCTAGCT
AACCGTGATCAGTTGCGTCGTGAAGCGCCATTTGCAATGTTGGCAGAAGATCCGGCTAGTAAAGAAGACTTTGTCGTCCG
TGGTATCATCGATGGCTACCTTCTTCTTGAAGACCGTATTGTCCTCTTTGACTATAAGACAGACCGCTTCACTCAACCTG
GTGAGCTTAAGGAACGCTACAAAGGGCAAATGAGCCTATATGCTAAAGCACTCAGCCAAGCCTATCAAATAGATAAGATT
GATAAATACCTTATTCTCCTAGGTGGAAAAGACTTGGAAGTCGTAGAAGTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexA Streptococcus pneumoniae R6

51.265

100

0.516