Detailed information NTG0853642

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: V6U66_RS08660
• Genome accession: NZ_CP145864
• Coordinates: 1862769..1864874 (-)
• Length: 701 a.a.
• NCBI ID: WP_410534466.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS7
• Function: repress competence development (at the early growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 1857769..1869874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U66_RS08635 (V6U66_08625)	-	1858032..1858331 (+)	300	WP_410534462.1	hypothetical protein	-
V6U66_RS08640 (V6U66_08630)	-	1858788..1859807 (-)	1020	WP_171021848.1	IS30-like element IS1139 family transposase	-
V6U66_RS08645 (V6U66_08635)	-	1860151..1860360 (-)	210	Protein_1651	hypothetical protein	-
V6U66_RS08650 (V6U66_08640)	-	1860404..1861480 (-)	1077	WP_410534463.1	hypothetical protein	-
V6U66_RS08655 (V6U66_08645)	-	1861492..1862565 (-)	1074	WP_410534464.1	hypothetical protein	-
V6U66_RS08660 (V6U66_08650)	clpE	1862769..1864874 (-)	2106	WP_410534466.1	AAA family ATPase	Regulator
V6U66_RS08665 (V6U66_08655)	-	1865610..1866701 (-)	1092	WP_410534467.1	nucleotidyltransferase	-
V6U66_RS08670 (V6U66_08660)	-	1866731..1868386 (-)	1656	WP_410534468.1	DUF2971 domain-containing protein	-
V6U66_RS08675 (V6U66_08665)	-	1868410..1869150 (-)	741	WP_014634945.1	class I SAM-dependent DNA methyltransferase	-
V6U66_RS08680 (V6U66_08670)	rsfS	1869355..1869708 (-)	354	WP_014632696.1	ribosome silencing factor	-

Sequence

Protein

• Length: 701 a.a.
• Molecular weight: 77392.25 Da
• Isoelectric Point: 4.6995

>NTDB_id=853642 V6U66_RS08660 WP_410534466.1 1862769..1864874(-) (clpE) [Streptococcus salivarius strain KSS7]
MNNNFNNMDDLFNQLMGNMGGYRSENRRYMINGREVTPEEFAIYRQTGQLPGNEGEAVNPTQHQGKGPKQDGILAKLGRN
LTEEAREGKLDPVIGRNKEIQEACEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGLEA
GTQYRGSFEENIQNLVNEVKEAGNIILFFDEIHQILGAGSTGDGQGSKGLADILKPALSRGELTVIGATTQDEYRNTILK
NAALARRFNEVKVNAPSAEDTFKILQGIRDLYEKHHNVILPDDVLKAAVDFSVQYIPQRSLPDKAIDLVDVTAAHLAAQH
PVTDVNAVEHEIEEEKAKQEAAAAKEDYEAALNAKVRIEELEKKIANHTEDLKVTATVNDVAESVERMTGIPVSQMGATD
IERLKDMGHRLQTKVIGQDKAVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIVLLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNTVI
IATSNAGFGYEANLTEDADKPELMDRLKPYFRPEFLNRFNAVIEFSHLSKEDLSKIVDLMLVEVNKTLSKKDIDLAVSEA
AKEYMTEEGYDEVMGVRPLRRVVEQQIRDKVTDFHLDNLDAKHLEADMEDGVLVIKEKDAE

Nucleotide

• Length: 2106 bp

>NTDB_id=853642 V6U66_RS08660 WP_410534466.1 1862769..1864874(-) (clpE) [Streptococcus salivarius strain KSS7]
ATGAACAACAACTTTAACAATATGGATGATCTTTTCAATCAATTGATGGGTAACATGGGTGGTTACCGTTCAGAAAACCG
TCGCTACATGATTAACGGTCGTGAAGTGACACCTGAAGAATTTGCTATCTACCGTCAAACAGGTCAATTACCTGGTAATG
AAGGTGAAGCAGTGAACCCAACTCAACATCAAGGTAAAGGACCTAAACAAGACGGTATCCTTGCTAAACTTGGTCGTAAC
TTGACTGAAGAAGCTCGCGAAGGTAAATTGGATCCTGTTATCGGACGTAACAAAGAAATCCAAGAAGCTTGTGAAATCTT
GGCTCGTCGTACCAAGAATAACCCTGTCCTTGTCGGGGACGCTGGGGTTGGTAAAACAGCCGTAGTTGAAGGTTTGGCTC
AAGCTATCGTTAATGGTGATGTCCCAGCTGCTATCAAGAACAAAGAAATCATCTCAATCGATATTTCTGGACTTGAAGCT
GGTACGCAATACCGTGGTAGCTTTGAAGAAAACATTCAAAACTTGGTAAATGAAGTCAAAGAAGCTGGAAATATCATCCT
CTTCTTCGATGAAATCCACCAAATTCTTGGTGCCGGAAGCACTGGCGATGGCCAAGGCTCTAAAGGTCTTGCTGATATCT
TGAAACCTGCTCTTTCACGTGGTGAATTGACAGTGATTGGTGCAACAACTCAAGATGAATACCGTAACACTATCTTGAAG
AACGCTGCTCTTGCTCGTCGTTTCAACGAAGTTAAGGTTAATGCTCCTTCTGCTGAAGATACTTTCAAGATTCTCCAAGG
TATTCGTGATCTTTATGAAAAACACCACAATGTTATCTTGCCAGATGATGTCTTGAAAGCAGCAGTAGATTTCTCTGTGC
AATACATTCCACAACGTAGCTTGCCAGATAAGGCTATCGACCTTGTCGATGTAACAGCTGCTCACTTGGCTGCTCAACAC
CCAGTGACTGATGTGAATGCTGTTGAACATGAAATCGAAGAAGAAAAAGCTAAACAAGAAGCTGCAGCTGCCAAAGAAGA
CTACGAAGCAGCTCTAAACGCTAAAGTTCGTATTGAAGAACTTGAAAAGAAAATTGCTAACCATACAGAAGACCTTAAAG
TCACAGCAACTGTTAACGATGTGGCTGAATCTGTAGAACGTATGACTGGTATTCCAGTGTCACAAATGGGTGCAACTGAT
ATCGAACGTTTGAAAGATATGGGTCACCGTTTGCAAACTAAGGTTATTGGTCAAGATAAGGCCGTTGAAGCAGTGGCACG
TGCCATCCGTCGTAACCGTGCAGGATTTGACGAAGGTAACCGTCCAATTGGTAGCTTCCTCTTTGTAGGACCTACTGGTG
TTGGTAAAACTGAGTTGGCTAAACAATTGGCTCTTGATATGTTCGGAACTAAAGATGCTATCATTCGTTTGGACATGTCA
GAATACAGCGACCGCACAGCCGTTTCTAAATTGATTGGTACAACAGCTGGTTATGTTGGTTATGATGACAATAGCAATAC
TTTGACAGAACGTGTTCGCCGTAACCCATACTCAATCGTTCTTCTCGACGAAATTGAAAAGGCTGACCCTCAAGTCATCA
CCCTTCTCCTCCAAGTTTTGGATGATGGTCGTTTGACAGATGGTCAAGGTAACACTGTAAACTTCAAGAATACTGTGATT
ATCGCAACTTCAAACGCTGGCTTTGGTTACGAAGCTAACTTGACAGAAGATGCTGATAAACCTGAACTTATGGATCGTTT
GAAACCTTACTTCCGTCCAGAATTCCTTAACCGTTTCAATGCTGTCATCGAATTCTCACACTTGAGCAAAGAAGATCTTT
CTAAGATTGTAGACCTTATGTTGGTTGAAGTTAACAAGACGCTTTCTAAGAAAGACATTGACTTGGCAGTTAGCGAAGCT
GCTAAAGAATACATGACTGAAGAAGGCTACGACGAAGTCATGGGTGTTCGTCCACTCCGTCGTGTGGTTGAACAACAAAT
CCGTGACAAAGTCACAGACTTCCACTTGGATAACCTTGATGCTAAACACCTAGAAGCTGATATGGAAGATGGTGTCTTGG
TTATCAAAGAAAAAGATGCTGAATAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (441-601)

• AAA lid domain (AAA_lid_9) (257-351)

• ATPase family associated with various cellular activities (AAA) (AAA) (116-248)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (608-678)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus mutans UA159	46.714	99.857	0.466
clpC	Lactococcus lactis subsp. cremoris KW2	49.088	93.866	0.461
clpE	Streptococcus pneumoniae R6	48.678	91.726	0.447
clpE	Streptococcus pneumoniae D39	48.678	91.726	0.447
clpE	Streptococcus pneumoniae Rx1	48.678	91.726	0.447
clpE	Streptococcus pneumoniae TIGR4	48.442	91.583	0.444
clpC	Bacillus subtilis subsp. subtilis str. 168	45.692	92.725	0.424
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.243	92.867	0.392
clpC	Streptococcus pneumoniae TIGR4	43.087	88.73	0.382
clpC	Streptococcus pneumoniae Rx1	43.087	88.73	0.382
clpC	Streptococcus pneumoniae D39	43.087	88.73	0.382
clpC	Streptococcus thermophilus LMD-9	42.95	88.017	0.378
clpC	Streptococcus thermophilus LMG 18311	42.811	88.302	0.378
clpC	Streptococcus mutans UA159	42.332	89.301	0.378