Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   V6U66_RS07835 Genome accession   NZ_CP145864
Coordinates   1693501..1695237 (-) Length   578 a.a.
NCBI ID   WP_073689834.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1688501..1700237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS07815 (V6U66_07805) - 1688535..1689518 (-) 984 WP_045771916.1 rhodanese-related sulfurtransferase -
  V6U66_RS07820 (V6U66_07810) - 1689709..1690410 (-) 702 WP_045771917.1 glucosamine-6-phosphate deaminase -
  V6U66_RS07825 (V6U66_07815) queA 1690561..1691604 (+) 1044 WP_045771918.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6U66_RS07830 (V6U66_07820) rcrQ 1691701..1693488 (-) 1788 WP_045771919.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS07835 (V6U66_07825) rcrP 1693501..1695237 (-) 1737 WP_073689834.1 ABC transporter ATP-binding protein Regulator
  V6U66_RS07840 (V6U66_07830) - 1695423..1695590 (-) 168 Protein_1493 LysR family transcriptional regulator -
  V6U66_RS07845 (V6U66_07835) - 1695600..1697153 (-) 1554 WP_037605638.1 BCCT family transporter -
  V6U66_RS07850 (V6U66_07840) - 1697270..1697392 (-) 123 WP_002269975.1 hypothetical protein -
  V6U66_RS07855 (V6U66_07845) rplL 1697601..1697969 (-) 369 WP_049529399.1 50S ribosomal protein L7/L12 -
  V6U66_RS07860 (V6U66_07850) rplJ 1698044..1698547 (-) 504 WP_021152203.1 50S ribosomal protein L10 -
  V6U66_RS07865 (V6U66_07855) - 1698838..1700046 (-) 1209 WP_014633462.1 ABC transporter permease -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64800.67 Da        Isoelectric Point: 5.3001

>NTDB_id=853634 V6U66_RS07835 WP_073689834.1 1693501..1695237(-) (rcrP) [Streptococcus salivarius strain KSS7]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=853634 V6U66_RS07835 WP_073689834.1 1693501..1695237(-) (rcrP) [Streptococcus salivarius strain KSS7]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTCACGGCGGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACCACGAGTATGAGCAGAT
TGGGGTATCCTCTTTGGTGACTCGTATTACATCAGATGCTTTTGTGCTTATGCAATTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCC
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAGCAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGAGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTTAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATCGCTATGATTGTGGCAATTGTTTGGTTTGCTCTTGAGCCATTAGGTTCTGGGACTTT
AGCAATCGGTGACTTGGTTGCTTTTATTGAGTACAGCTTCCATGCACTATTGTCCTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAATTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCCTACACAACATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATCGGATCAACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGTGAT
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCTCTACTCTTTACTGGAACTATCGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGCAGCAACCTTTCTGGGGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGTCGTCTAAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTAGCCCAACGTGTGGGAACTATCATGG
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.85

92.042

0.367