Detailed information NTG0853539

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QYL87_RS06160
• Genome accession: NZ_CP129461
• Coordinates: 1322082..1323056 (+)
• Length: 324 a.a.
• NCBI ID: WP_014613820.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain N13-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1317082..1328056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYL87_RS06125	rpmG	1317467..1317631 (+)	165	WP_256726578.1	50S ribosomal protein L33	-
QYL87_RS06130	-	1317783..1318322 (+)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
QYL87_RS06135	-	1318341..1319780 (+)	1440	WP_096636501.1	rhomboid family intramembrane serine protease	-
QYL87_RS06140	-	1319782..1319985 (+)	204	WP_014613816.1	YqgQ family protein	-
QYL87_RS06145	-	1319982..1320968 (+)	987	WP_014613817.1	ROK family glucokinase	-
QYL87_RS06150	-	1320969..1321280 (+)	312	WP_014613818.1	MTH1187 family thiamine-binding protein	-
QYL87_RS06155	-	1321293..1321922 (+)	630	WP_096636500.1	MBL fold metallo-hydrolase	-
QYL87_RS06160	comGA	1322082..1323056 (+)	975	WP_014613820.1	competence type IV pilus ATPase ComGA	Machinery gene
QYL87_RS06165	comGB	1323025..1324092 (+)	1068	WP_063284398.1	competence type IV pilus assembly protein ComGB	-
QYL87_RS06170	comGC	1324105..1324428 (+)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
QYL87_RS06175	comGD	1324406..1324846 (+)	441	WP_014613823.1	competence type IV pilus minor pilin ComGD	-
QYL87_RS06180	-	1324951..1325151 (+)	201	WP_020219623.1	hypothetical protein	-
QYL87_RS06185	-	1325057..1325542 (+)	486	WP_080552896.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
QYL87_RS06190	-	1325706..1326233 (+)	528	WP_014613826.1	shikimate kinase	-
QYL87_RS06195	gcvT	1326391..1327482 (+)	1092	WP_015729161.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36846.58 Da
• Isoelectric Point: 7.5584

>NTDB_id=853539 QYL87_RS06160 WP_014613820.1 1322082..1323056(+) (comGA) [Staphylococcus pseudintermedius strain N13-1]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=853539 QYL87_RS06160 WP_014613820.1 1322082..1323056(+) (comGA) [Staphylococcus pseudintermedius strain N13-1]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCGTCAGACATTCATTTTATCCCATCACAATC
ACAAGTTGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAACGGCATTACGCAAATTTCCGTTAACGAAAAAGCTGATATTACGTA
TGGATCGTCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGTGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583