Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   V6U65_RS04510 Genome accession   NZ_CP145863
Coordinates   920433..920915 (+) Length   160 a.a.
NCBI ID   WP_270333819.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS6     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 915433..925915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U65_RS04490 (V6U65_04490) queG 916307..917425 (+) 1119 WP_410532957.1 tRNA epoxyqueuosine(34) reductase QueG -
  V6U65_RS04495 (V6U65_04495) prfB 917478..918576 (+) 1099 WP_410532959.1 peptide chain release factor 2 -
  V6U65_RS04500 (V6U65_04500) ftsE 918664..919356 (+) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  V6U65_RS04505 (V6U65_04505) ftsX 919349..920278 (+) 930 WP_003092823.1 permease-like cell division protein FtsX -
  V6U65_RS04510 (V6U65_04510) mutX 920433..920915 (+) 483 WP_270333819.1 NUDIX hydrolase Machinery gene
  V6U65_RS04515 (V6U65_04515) - 920925..922103 (+) 1179 WP_156246682.1 AI-2E family transporter -
  V6U65_RS04520 (V6U65_04520) - 922093..923322 (+) 1230 WP_410532962.1 tetratricopeptide repeat protein -
  V6U65_RS04525 (V6U65_04525) lepB 923444..924001 (+) 558 WP_037597744.1 signal peptidase I -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18851.19 Da        Isoelectric Point: 4.3999

>NTDB_id=853494 V6U65_RS04510 WP_270333819.1 920433..920915(+) (mutX) [Streptococcus salivarius strain KSS6]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEEGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=853494 V6U65_RS04510 WP_270333819.1 920433..920915(+) (mutX) [Streptococcus salivarius strain KSS6]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGAGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTACGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTGGTAGATAAAACTGTAACATTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725