Detailed information NTG0853487

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QY487_RS17500
• Genome accession: NZ_CP129459
• Coordinates: 3544309..3545454 (+)
• Length: 381 a.a.
• NCBI ID: WP_094247421.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SSF6
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3539309..3550454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY487_RS17480 (QY487_17480)	-	3539783..3540499 (-)	717	WP_025853599.1	Crp/Fnr family transcriptional regulator	-
QY487_RS17485 (QY487_17485)	narK	3540597..3541787 (-)	1191	WP_025853600.1	nitrate transporter NarK	-
QY487_RS17490 (QY487_17490)	argS	3541922..3543592 (-)	1671	WP_094247422.1	arginine--tRNA ligase	-
QY487_RS17495 (QY487_17495)	-	3543589..3544017 (-)	429	WP_003151069.1	DUF1934 family protein	-
QY487_RS17500 (QY487_17500)	rapF	3544309..3545454 (+)	1146	WP_094247421.1	Rap family tetratricopeptide repeat protein	Regulator
QY487_RS17505 (QY487_17505)	-	3545438..3545557 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
QY487_RS17510 (QY487_17510)	speB	3545680..3546117 (-)	438	Protein_3392	agmatinase	-
QY487_RS17515 (QY487_17515)	-	3546279..3547706 (-)	1428	WP_071543386.1	DUF885 family protein	-
QY487_RS17520 (QY487_17520)	-	3547707..3549047 (-)	1341	WP_094247420.1	MATE family efflux transporter	-
QY487_RS17525 (QY487_17525)	-	3549044..3550099 (-)	1056	WP_071543387.1	SagB/ThcOx family dehydrogenase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45782.29 Da
• Isoelectric Point: 5.0722

>NTDB_id=853487 QY487_RS17500 WP_094247421.1 3544309..3545454(+) (rapF) [Bacillus velezensis strain SSF6]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSELLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=853487 QY487_RS17500 WP_094247421.1 3544309..3545454(+) (rapF) [Bacillus velezensis strain SSF6]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGAGCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	69.816	100	0.698
rapC	Bacillus subtilis subsp. subtilis str. 168	53.684	99.738	0.535