Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   J3989_RS05310 Genome accession   NZ_AP024489
Coordinates   1098928..1099389 (-) Length   153 a.a.
NCBI ID   WP_002235024.1    Uniprot ID   Q9JTP4
Organism   Neisseria meningitidis strain NIID777     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1093928..1104389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J3989_RS05290 (NMNIID777_09770) surE 1095448..1096194 (+) 747 WP_207176803.1 5'/3'-nucleotidase SurE -
  J3989_RS05295 (NMNIID777_09780) - 1096450..1097697 (+) 1248 WP_002239875.1 M23 family metallopeptidase -
  J3989_RS05300 (NMNIID777_09790) - 1098058..1098540 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  J3989_RS05305 (NMNIID777_09800) - 1098693..1098854 (-) 162 WP_002239941.1 hypothetical protein -
  J3989_RS05310 (NMNIID777_09810) recX 1098928..1099389 (-) 462 WP_002235024.1 recombination regulator RecX Regulator
  J3989_RS05315 (NMNIID777_09820) - 1099457..1100164 (-) 708 WP_002235023.1 phosphoglycolate phosphatase -
  J3989_RS05320 (NMNIID777_09830) - 1100571..1101836 (+) 1266 WP_101041525.1 Glu/Leu/Phe/Val dehydrogenase -
  J3989_RS05325 (NMNIID777_09840) - 1101894..1102700 (-) 807 WP_101093065.1 DUF4198 domain-containing protein -
  J3989_RS05330 (NMNIID777_09850) - 1103045..1103254 (+) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17716.09 Da        Isoelectric Point: 10.0960

>NTDB_id=85348 J3989_RS05310 WP_002235024.1 1098928..1099389(-) (recX) [Neisseria meningitidis strain NIID777]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=85348 J3989_RS05310 WP_002235024.1 1098928..1099389(-) (recX) [Neisseria meningitidis strain NIID777]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9JTP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967

Multiple sequence alignment