Detailed information NTG0853310

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: V6U63_RS08650
• Genome accession: NZ_CP145861
• Coordinates: 1888918..1891743 (-)
• Length: 941 a.a.
• NCBI ID: WP_195914531.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1883918..1896743

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U63_RS08615 (V6U63_08600)	-	1884038..1885099 (-)	1062	WP_195187645.1	M24 family metallopeptidase	-
V6U63_RS08620 (V6U63_08605)	-	1885231..1885953 (-)	723	WP_227071955.1	hypothetical protein	-
V6U63_RS08625 (V6U63_08610)	-	1885943..1886764 (-)	822	WP_195914533.1	ABC transporter ATP-binding protein	-
V6U63_RS08630 (V6U63_08615)	-	1886893..1887753 (-)	861	WP_201036112.1	thioredoxin family protein	-
V6U63_RS08635 (V6U63_08620)	-	1888021..1888221 (-)	201	WP_037604727.1	hypothetical protein	-
V6U63_RS08640 (V6U63_08625)	-	1888258..1888407 (-)	150	WP_162837454.1	hypothetical protein	-
V6U63_RS08645 (V6U63_08630)	-	1888593..1888823 (-)	231	WP_048674959.1	DUF3923 family protein	-
V6U63_RS08650 (V6U63_08635)	uvrA	1888918..1891743 (-)	2826	WP_195914531.1	excinuclease ABC subunit UvrA	Machinery gene
V6U63_RS08655 (V6U63_08640)	-	1892040..1892984 (+)	945	WP_037611177.1	magnesium transporter CorA family protein	-
V6U63_RS08660 (V6U63_08645)	-	1893054..1893725 (+)	672	WP_002884401.1	DUF1129 domain-containing protein	-
V6U63_RS08665 (V6U63_08650)	-	1893842..1894723 (+)	882	WP_037611176.1	DUF4300 family protein	-
V6U63_RS08670 (V6U63_08655)	rpsR	1894845..1895084 (-)	240	WP_000068665.1	30S ribosomal protein S18	-
V6U63_RS08675 (V6U63_08660)	ssb	1895126..1895644 (-)	519	WP_048790101.1	single-stranded DNA-binding protein	Machinery gene
V6U63_RS08680 (V6U63_08665)	rpsF	1895656..1895946 (-)	291	WP_038676771.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103615.52 Da
• Isoelectric Point: 5.6771

>NTDB_id=853310 V6U63_RS08650 WP_195914531.1 1888918..1891743(-) (uvrA) [Streptococcus salivarius strain KSS3]
MQDKLVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGL
SPAISIDQKTTSKNPRSTVGTATEINDYLRLLYARVGVPYCPNGHGAIQSSSVEQIVDEVLALPERTRMQILAPIVRRRK
GQHKAVFERVQKDGYVRVRVDGEIYDVTEVPELSKSKMHNIEVVVDRLVNKDGIRSRLFDSVEAALRLADGYLIVDTMDD
NELLYSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDMDLVIPDASMTLREGALAPWNPISSNYYPAML
EQAMEQFGVDMDTPFEDLKKEEQDLILYGSGDREFHFHYVNDFGGVRDIDIPFEGVVTNINRRYHETNSDFTRNVMRGYM
NELSCPTCHGYRLNEAALSVRVGGENGLNIGQISDLSISDHLKEIDNLELGENEGVIARPIVKEIKDRLTFLNNVGLNYL
TLSRMAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLISSLKKMRDLGNTLIVVEHDEDTMREADWLI
DVGPGAGAFGGQIMASGTPEEVAKNKKSITGQYLSGAKSIPVPTERRVGNGRFIEVTGASENNLKNVSVKFPLGKLIAVT
GVSGSGKSTLVNGILKKKIAQELNRNSEKPGKHKSVTGIEHIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVRYKGKNIAEILDMTVDDAVDFF
AAIPKIARKVQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSFYILDEPTTGLHTDDIARLLKVLQRFAD
DGNTVLVIEHNLDVIKTADHIIDLGPEGGVGGGTIVATGTPEEVAAVPESYTGQYLKEKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=853310 V6U63_RS08650 WP_195914531.1 1888918..1891743(-) (uvrA) [Streptococcus salivarius strain KSS3]
ATGCAAGATAAGTTAGTGATTCATGGAGCAAGAGCTCACAATTTAAAAAATATCGATGTGGAGATTCCGCGTGATAAACT
GGTGGTGGTGACGGGTTTATCAGGTTCTGGGAAGTCTTCTTTGGCCTTTGATACCATCTATGCAGAGGGGCAACGTCGTT
ATGTTGAAAGTCTCTCGGCTTATGCCCGCCAGTTTTTGGGAAATATGGAGAAACCTGATGTGGACTCGATTGATGGTTTG
AGTCCTGCCATCTCCATTGACCAGAAAACAACAAGCAAAAACCCTCGTTCGACGGTCGGAACGGCAACAGAGATTAATGA
CTATCTTCGTCTCCTGTATGCGCGTGTGGGTGTCCCTTATTGTCCTAATGGTCATGGAGCCATTCAGTCGTCCTCTGTGG
AACAGATTGTGGACGAGGTTCTAGCTCTTCCTGAGCGTACGCGTATGCAGATTTTAGCGCCGATTGTTCGTCGTAGAAAA
GGGCAACACAAGGCCGTTTTTGAGCGCGTACAAAAGGACGGTTATGTTCGTGTTCGTGTAGATGGTGAGATTTACGATGT
CACAGAAGTGCCAGAGTTGTCTAAGTCTAAAATGCATAATATAGAAGTAGTTGTAGACCGCTTGGTGAATAAGGATGGTA
TCCGTAGTCGTCTCTTTGATTCGGTGGAGGCGGCCCTACGTTTAGCAGATGGCTACTTGATTGTGGATACCATGGATGAT
AATGAACTGCTTTACTCAGAACATTATTCTTGTCCGGTTTGTGGCTTCACAGTGCCAGAGTTGGAGCCTCGTCTCTTTTC
ATTCAATGCGCCATTTGGCTCTTGTCCGACCTGTGATGGTTTGGGTAATAAACTGGAAGTTGATATGGATTTGGTTATCC
CTGATGCTAGTATGACCTTGCGTGAAGGTGCTCTGGCGCCTTGGAATCCTATTTCGTCCAACTATTATCCAGCTATGCTT
GAGCAGGCTATGGAGCAGTTCGGCGTGGATATGGATACGCCATTTGAAGATCTTAAAAAAGAAGAACAAGATTTGATTCT
CTACGGATCTGGGGATCGTGAATTCCATTTCCATTATGTTAATGATTTTGGTGGGGTGCGTGATATTGACATTCCTTTTG
AAGGGGTTGTGACTAATATCAATCGTCGCTATCACGAGACCAATAGTGATTTCACTCGCAATGTCATGCGAGGTTATATG
AATGAGCTGTCATGTCCAACTTGTCATGGCTATCGTCTTAACGAAGCAGCACTCTCAGTTCGTGTTGGTGGTGAGAATGG
TCTCAATATTGGTCAAATCTCTGATTTGTCTATTTCAGATCATCTTAAGGAAATCGATAACCTTGAATTAGGTGAAAACG
AGGGAGTGATCGCTCGTCCAATTGTTAAGGAAATCAAGGATCGCTTGACTTTCTTAAATAATGTAGGCCTTAATTATTTG
ACTCTCTCTCGTATGGCTGGAACCCTTTCAGGTGGTGAGAGTCAGCGTATCCGTTTGGCGACACAGATTGGCTCTAACCT
TTCTGGAGTCCTATATGTGTTGGATGAGCCTTCTATTGGGCTTCATCAGCGTGACAATGATCGCTTGATTTCAAGTCTTA
AAAAGATGCGTGACCTTGGCAATACCTTGATTGTGGTGGAGCATGATGAAGATACCATGCGTGAGGCTGACTGGCTTATC
GATGTGGGACCTGGTGCTGGTGCCTTTGGTGGGCAAATCATGGCTTCGGGAACTCCAGAGGAAGTGGCTAAGAACAAGAA
ATCAATCACCGGGCAATATTTGTCAGGTGCTAAATCAATTCCTGTACCGACGGAACGTCGTGTAGGTAATGGTCGTTTTA
TCGAGGTTACAGGAGCTAGCGAAAATAACCTTAAGAATGTGTCTGTCAAGTTTCCACTTGGAAAGTTGATTGCAGTCACA
GGTGTTTCTGGTTCGGGAAAATCGACTTTGGTTAACGGAATTCTCAAGAAAAAAATTGCCCAAGAGCTTAATCGTAATAG
TGAGAAGCCAGGTAAACACAAATCAGTGACAGGAATCGAGCATATCGAGCGTTTGATTGATATTGACCAAAGTCCAATTG
GGCGTACACCTCGTTCTAATCCAGCGACTTACACAGGCGTCTTTGACGATATTCGTGATCTGTTTGCTCAAACCAATGAG
GCCAAGATTCGAGGTTATAAGAAGGGGCGTTTCTCTTTCAATGTCAAGGGTGGCCGTTGTGAAGCCTGCTCTGGTGATGG
TATTATCAAGATTGAGATGCACTTCCTACCTGATGTTTATGTTCCTTGTGAGGTTTGCCATGGCACACGCTATAATTCAG
AAACCTTAGAAGTTCGTTATAAAGGAAAAAATATTGCGGAGATTCTGGATATGACAGTTGATGACGCAGTTGACTTCTTT
GCGGCTATTCCTAAGATTGCTCGTAAGGTACAGACTATCAAGGATGTAGGACTTGGGTATGTGACCCTGGGACAACCAGC
AACAACCCTCTCAGGTGGTGAAGCCCAACGTATGAAGCTAGCTAGTGAGTTGCACAAACGCTCTACAGGGAAGTCTTTCT
ATATTCTAGATGAACCTACGACAGGTCTTCATACAGATGACATTGCGCGTCTCTTGAAGGTGTTGCAGCGTTTTGCGGAC
GATGGGAACACTGTTCTCGTAATCGAGCACAATCTGGATGTTATAAAGACAGCAGACCATATCATTGATTTGGGTCCTGA
AGGCGGTGTCGGTGGAGGTACCATCGTAGCTACAGGGACTCCAGAAGAGGTAGCAGCTGTTCCAGAAAGCTACACTGGAC
AATATTTGAAAGAAAAATTGAAATAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-239)

• ABC transporter (ABC_tran) (624-860)

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	85.426	99.894	0.853
uvrA	Streptococcus pneumoniae TIGR4	85.426	99.894	0.853
uvrA	Streptococcus pneumoniae D39	85.426	99.894	0.853