Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   V6U63_RS04615 Genome accession   NZ_CP145861
Coordinates   937537..938019 (+) Length   160 a.a.
NCBI ID   WP_002885066.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS3     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 932537..943019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U63_RS04595 (V6U63_04590) queG 933410..934528 (+) 1119 WP_349955267.1 tRNA epoxyqueuosine(34) reductase QueG -
  V6U63_RS04600 (V6U63_04595) prfB 934581..935679 (+) 1099 WP_096833329.1 peptide chain release factor 2 -
  V6U63_RS04605 (V6U63_04600) ftsE 935767..936459 (+) 693 WP_002885005.1 cell division ATP-binding protein FtsE -
  V6U63_RS04610 (V6U63_04605) ftsX 936452..937381 (+) 930 WP_037604859.1 permease-like cell division protein FtsX -
  V6U63_RS04615 (V6U63_04610) mutX 937537..938019 (+) 483 WP_002885066.1 NUDIX hydrolase Machinery gene
  V6U63_RS04620 (V6U63_04615) - 938029..939207 (+) 1179 WP_004182599.1 AI-2E family transporter -
  V6U63_RS04625 (V6U63_04620) - 939197..940426 (+) 1230 WP_073687777.1 tetratricopeptide repeat protein -
  V6U63_RS04630 (V6U63_04625) lepB 940548..941105 (+) 558 WP_349955266.1 signal peptidase I -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18793.15 Da        Isoelectric Point: 4.4433

>NTDB_id=853274 V6U63_RS04615 WP_002885066.1 937537..938019(+) (mutX) [Streptococcus salivarius strain KSS3]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=853274 V6U63_RS04615 WP_002885066.1 937537..938019(+) (mutX) [Streptococcus salivarius strain KSS3]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTACGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTAGTAGACAAGACTGTAACCTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725