Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V6U62_RS07405 Genome accession   NZ_CP145860
Coordinates   1620322..1622109 (-) Length   595 a.a.
NCBI ID   WP_195914459.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1615322..1627109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U62_RS07375 (V6U62_07355) - 1615424..1616194 (-) 771 WP_070654931.1 nucleoside phosphorylase -
  V6U62_RS07380 (V6U62_07360) - 1616274..1616768 (-) 495 WP_014621324.1 DUF6773 family protein -
  V6U62_RS07385 (V6U62_07365) - 1616782..1616979 (-) 198 WP_002885991.1 helix-turn-helix transcriptional regulator -
  V6U62_RS07390 (V6U62_07370) - 1617155..1618138 (-) 984 WP_195914462.1 rhodanese-related sulfurtransferase -
  V6U62_RS07395 (V6U62_07375) - 1618328..1619029 (-) 702 WP_195914461.1 glucosamine-6-phosphate deaminase -
  V6U62_RS07400 (V6U62_07380) queA 1619181..1620224 (+) 1044 WP_195914460.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V6U62_RS07405 (V6U62_07385) rcrQ 1620322..1622109 (-) 1788 WP_195914459.1 ABC transporter ATP-binding protein Regulator
  V6U62_RS07410 (V6U62_07390) rcrP 1622122..1623858 (-) 1737 WP_021144542.1 ABC transporter ATP-binding protein Regulator
  V6U62_RS07415 (V6U62_07395) - 1624338..1625531 (-) 1194 WP_195188019.1 tyrosine-type recombinase/integrase -
  V6U62_RS07420 (V6U62_07400) - 1625549..1625773 (-) 225 WP_195188018.1 DUF3173 family protein -
  V6U62_RS07425 (V6U62_07405) - 1625874..1626890 (-) 1017 WP_229036680.1 replication protein RepA -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66423.65 Da        Isoelectric Point: 5.2508

>NTDB_id=853191 V6U62_RS07405 WP_195914459.1 1620322..1622109(-) (rcrQ) [Streptococcus salivarius strain KSS2]
MKKNKMKISHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLAIMKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDKSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVSPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=853191 V6U62_RS07405 WP_195914459.1 1620322..1622109(-) (rcrQ) [Streptococcus salivarius strain KSS2]
ATGAAGAAAAATAAAATGAAAATAAGTCATTCCTCAAGTTTTGGCCGCCTTTGGTCCTACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCTATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CCGAGTTAACTAAAAATACGCTGGCCATCATGAAGGGTGTCGAAGGCGCTCATATCAACGTCTCCTATGTTGGTTTGGTT
TTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACCAATGCCGTGCA
AGCGACGGTTCAAGATATGCGAAATGAGATGACCGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TCGGGGACCTCTTGGGCCGCTTTACCAGTGACGTCGAGACAGTATCTAATGCCTTGCAACAGTCATTCTTGCAGGTTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACATTCTTTGGTGCCCGCTTTATCATGAGTAAGTCTCAGCCCTACTTTAAACAACAGGCTGATGCTCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAAATCCTTG
GATGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTCATTTCAGGACTTATGATGCCGGT
TCTTAACGGTTTATCTGACTTGACCTATCTAATTGTCGCTGTTTTAGGTGGTTTGCAAGTCTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAACCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAAAGTGCTAAATCTTCTTTAGACCGTATTTTCCAACTCATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTAGAGGGAGATTTGACTGGCCAAGTTAGCTTCAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAGTCCTGGTGAAATGGTGGCCATTGTCGGTCCTACCGGTGCTGGGAAATCAACCATTATCAAC
CTTCTCATGCGTTTCTATGATGTGACTGCCGGGTCTATCTCGGTTGACGGTCATGATATCCGTAACCTGTCTCGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAGGAAATTGTTGAAGCTGCTAAGGCTGCCAATGTGGATCACTTTATCCGTACCCTACCTGGT
GGTTACAACATGGAAATGAACCAGGAATCAAGCAACATTTCACTGGGACAAAAGCAACTTTTGACTATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCGACCTCATCGGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CTATGAAGACCCTCATGCAAGGTCGAACAAGCTTTGTCATTGCCCACCGTCTGTCGACTATTCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGACTT
GTATAATAGCCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.23

99.496

0.42