Detailed information NTG0853155

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: QYQ96_RS10760
• Genome accession: NZ_CP129421
• Coordinates: 2370660..2374193 (+)
• Length: 1177 a.a.
• NCBI ID: WP_304572163.1
• Uniprot ID: -
• Organism: Vibrio metoecus strain ZF102
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2365660..2379193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYQ96_RS10740 (QYQ96_10740)	erpA	2366239..2366580 (-)	342	WP_304572161.1	iron-sulfur cluster insertion protein ErpA	-
QYQ96_RS10745 (QYQ96_10745)	hemL	2366864..2368162 (+)	1299	WP_304572162.1	glutamate-1-semialdehyde 2,1-aminomutase	-
QYQ96_RS10750 (QYQ96_10750)	-	2368416..2369501 (+)	1086	WP_055031728.1	AI-2E family transporter	-
QYQ96_RS10755 (QYQ96_10755)	rsmC	2369574..2370596 (+)	1023	WP_055029691.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
QYQ96_RS10760 (QYQ96_10760)	chiS	2370660..2374193 (+)	3534	WP_304572163.1	two-component system sensor histidine kinase ChiS	Regulator
QYQ96_RS10765 (QYQ96_10765)	-	2374876..2376546 (+)	1671	WP_000880704.1	ABC transporter substrate-binding protein	-
QYQ96_RS10770 (QYQ96_10770)	-	2376716..2377702 (+)	987	WP_000540340.1	ABC transporter permease	-
QYQ96_RS10775 (QYQ96_10775)	-	2377705..2378730 (+)	1026	WP_000646272.1	ABC transporter permease	-

Sequence

Protein

• Length: 1177 a.a.
• Molecular weight: 132965.23 Da
• Isoelectric Point: 6.6938

>NTDB_id=853155 QYQ96_RS10760 WP_304572163.1 2370660..2374193(+) (chiS) [Vibrio metoecus strain ZF102]
MRLCPRFSLDLLVKVKKLVNFVTLGFSCHSPAHGSRAPTSITKSNALIMFRFYRKQKFKRLQNTLMAAFLALSIIPLTIT
ALFFLHSHSKDLEEQSTSYLVSVRDTKQQQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQ
QRYIPGSGDQIKTSVLPQSSSYVGSERYRLLHKRYHWAFLELLKRSDFDDILLVDIEGNVVYSIYKYDNFGTNLLTGKYQ
DANLGHTFKRLEQTVNEQRKTNEDFTPVVISDFVEEDGKQYAWLGAPIIQQGYLHSYAMFRLPSNAITKLIADGNNNPSM
QTILVGQDLRSRTLTSAEIAVEKSKQVVELALSGKRSVGTYTNTDGEQVIAAYAPINLKSIHWALVVELPEKEAFARVRQ
LEKLFVFAMLTAIVLVVIASHYLSNFITAPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFERMQRSIREKISLI
KSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALVSGANGPLTAAHKYQLDIIISSGQRLA
TLVDDLLDYHKMRYGALDIQKGAVDLSSATRLVLELSHHLLGKKTLRIINQVPELPVWVSADPQRLEQVLYNLIGNAIKY
TSEGKIVISATYMDDKIRVQVVDTGQGIPAEQLEQIFEPLIQAGRDASRYRQGAGLGLSISRQLIELMNGTLYVSSQPMV
GTTFSFTLPLATQDEIAQARLTELPHFQAPEILDAELPEQSTLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTVQ
DGHEVLEAVKREKPELLLLDIMMPGMSGYQVCEKLRQSYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELA
ARIVAHLTASKAELRRVENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKIRFANEAASRLFRRTPEQ
LKRSNAEELIAPKYLNIDQEHYCGNIDVYVDDVRQHLSADVLRLPEGSGLQAMYIFNVGGSINAARIYNLETAVEALSSY
AFEGDKDKLQQLKELGGEFTRLADKASGEYQSKQDLMRSVLVEAMTSALDYWERVSGQSKFTFAEQSGLWRVYLDRSTLQ
TRTLDKYLRIETLPKTPRWRTVLNSLDYILEHCKESSPDRTHIEMQRDKLQKLLISE

Nucleotide

• Length: 3534 bp

>NTDB_id=853155 QYQ96_RS10760 WP_304572163.1 2370660..2374193(+) (chiS) [Vibrio metoecus strain ZF102]
TTGCGCCTATGCCCACGCTTTAGCTTGGACTTACTTGTCAAAGTAAAAAAACTCGTTAATTTCGTTACTTTAGGTTTTTC
TTGTCATTCACCCGCTCATGGCTCGCGAGCGCCAACGAGTATCACCAAAAGTAACGCCTTAATTATGTTTAGGTTCTATC
GAAAACAAAAATTCAAGCGCCTGCAGAATACCCTGATGGCGGCCTTTTTGGCTCTTAGCATTATTCCATTGACGATTACC
GCGCTGTTTTTCCTCCATTCCCACAGTAAAGACTTGGAAGAGCAAAGCACCTCATACCTCGTTTCGGTACGAGATACCAA
GCAGCAGCAAGTGATCGATTACATGATGGCCAAAGAGTCAGAAGTCATGGGCTTTGTCCGTTCCGAGCTTGCTTATGCCA
GTGGCGGACGTTTTTATGGTTTAGTCAATGCATTCCAACGCTTGGATGTCAGTATCGAAGCGGCTCGTGAACATGCCCAG
CAGCGTTACATCCCCGGTTCTGGCGATCAAATAAAAACGTCAGTGCTGCCACAATCCAGCAGTTATGTGGGAAGCGAACG
TTACCGGTTACTACACAAACGCTATCACTGGGCCTTTTTAGAACTCCTAAAACGCTCAGATTTCGATGACATTCTCTTAG
TTGATATTGAAGGCAACGTCGTTTACTCCATTTATAAATACGACAACTTTGGCACCAATTTATTAACGGGCAAATATCAA
GATGCCAACCTAGGGCATACGTTTAAACGTCTAGAACAAACGGTCAATGAACAACGCAAAACCAATGAAGACTTCACCCC
AGTGGTCATCTCAGATTTTGTCGAAGAAGACGGAAAACAGTACGCTTGGCTCGGCGCACCAATTATTCAACAAGGCTACT
TACACAGCTATGCCATGTTCCGCCTACCCAGTAATGCCATCACCAAACTGATCGCCGATGGCAACAATAATCCATCAATG
CAAACCATACTCGTCGGCCAAGATTTGCGTTCACGAACGCTAACGTCTGCAGAAATCGCCGTCGAAAAGAGCAAACAAGT
GGTCGAGCTCGCCTTGTCTGGCAAGCGTTCGGTAGGTACCTATACGAATACCGATGGTGAACAAGTCATTGCTGCTTATG
CCCCTATCAATCTGAAAAGCATTCATTGGGCTTTAGTGGTTGAGCTTCCAGAAAAAGAAGCGTTTGCCCGTGTACGTCAA
TTGGAAAAGCTCTTTGTTTTTGCCATGTTGACTGCGATTGTATTAGTGGTGATAGCTTCGCATTATCTCTCGAACTTTAT
TACCGCCCCACTATTAAAACTCACTTGGGCCGCAGAACGTGTCTCTGCCGGAGATCTTGATGAGGCAATGATCAATACCG
AGCGGAAAGATGAAATTGGTCGTTTAGCCGTCAGTTTCGAGCGAATGCAGCGCTCTATCCGTGAAAAAATCTCACTCATC
AAATCACAAAATAAAGAGTTAGAGAGCAACCTGCTGATCATCCGTAAACAGAACGATGAATTGCAGCTCGCGAACAAGCT
CAAAGATGAATTCCTCGCCACCACATCACACGAATTGCGTACTCCACTACACGGTATGATTGGAATTGCCGAAGCATTAG
TTTCAGGTGCCAATGGCCCACTGACTGCCGCTCATAAATATCAACTCGATATCATTATTAGTAGTGGTCAGCGCTTAGCC
ACCTTGGTGGACGATTTGCTGGATTATCACAAAATGCGCTATGGCGCGTTGGATATTCAAAAAGGCGCCGTCGATTTATC
CAGTGCGACGCGGTTAGTGCTAGAGCTCTCGCATCACTTACTCGGCAAAAAAACACTGCGTATTATTAACCAAGTTCCAG
AGCTACCAGTCTGGGTTTCTGCGGATCCACAACGCTTGGAGCAAGTGCTGTATAACCTGATTGGTAATGCGATTAAATAT
ACGTCGGAAGGCAAGATTGTTATCTCCGCAACCTATATGGACGATAAAATCCGCGTACAGGTGGTGGATACTGGCCAAGG
TATTCCTGCCGAGCAACTGGAGCAAATATTCGAACCTCTGATCCAAGCAGGTCGTGATGCGAGCCGCTACCGTCAGGGCG
CGGGATTAGGGTTGTCTATCAGCCGTCAGCTTATTGAGCTGATGAATGGTACACTTTATGTCAGCAGCCAGCCGATGGTT
GGCACGACATTTAGCTTTACTCTACCGCTAGCGACTCAAGATGAGATTGCTCAAGCACGCTTAACTGAACTGCCCCACTT
CCAAGCTCCAGAAATTTTGGATGCCGAACTTCCAGAGCAGAGCACGCTGCCTGAAAATGAGCACGGTCCATTACTTTTAG
TCGCTGATGATGAACCTGTTAATCTCAGAGTATTAGACAGCTTCTTACGTCTTGAAGGTTACCGTGTTCATACTGTACAA
GATGGTCATGAAGTGCTTGAAGCCGTGAAACGTGAAAAGCCTGAGCTCTTGTTACTCGATATCATGATGCCAGGCATGAG
CGGTTATCAAGTGTGTGAAAAACTGAGACAAAGTTACGACCATGCTGAGCTCCCCATCATTATGCTAACGGCCCTGAATC
AGTCCGATGACCGAGTGCGTGGTTTTGAAGCCGGTGCGAATGACTACTTATCGAAGCCATTTAACAAACAAGAGCTGGCG
GCTCGTATCGTAGCTCACCTTACCGCGAGCAAAGCAGAGTTGCGCCGTGTTGAAAATGCGCAGCTTCAAAAAGAGTTAAA
ACACCGTGCGATGGTTGAAGCGAGTCTCCTTGAAACTCAAGGACGCTTGTTAGAACAACTAGAATCCGCCCCAGAAGCGA
TACTGTGTGTCAAAGAAGGCAATAAAATACGCTTTGCCAACGAGGCCGCATCACGCCTATTTAGACGCACGCCAGAGCAG
CTTAAACGCTCGAATGCAGAAGAGTTAATCGCCCCCAAATACCTCAACATCGATCAAGAACATTACTGCGGCAATATTGA
TGTTTACGTTGATGATGTGCGCCAACATTTATCCGCTGACGTACTACGCTTACCGGAAGGATCCGGATTGCAAGCCATGT
ACATCTTTAATGTCGGAGGCAGTATTAATGCTGCACGTATTTATAATCTAGAAACCGCGGTAGAAGCCCTCTCAAGCTAC
GCTTTCGAAGGTGATAAAGATAAATTACAACAGCTCAAAGAATTGGGTGGTGAGTTCACTCGCCTGGCCGATAAAGCATC
CGGTGAGTATCAATCCAAACAAGATTTGATGCGTAGTGTCTTGGTCGAAGCCATGACCAGCGCTCTTGATTATTGGGAGC
GAGTCTCAGGACAAAGTAAATTTACCTTTGCTGAACAAAGCGGCTTGTGGCGTGTGTATCTTGACCGCAGCACCTTACAA
ACTCGTACCCTAGATAAATATTTACGCATTGAGACATTGCCTAAAACACCACGCTGGAGAACGGTGCTTAACTCGCTCGA
TTACATCCTTGAGCACTGTAAAGAGTCAAGCCCAGATCGCACTCACATCGAGATGCAGCGCGATAAGCTACAGAAGTTAC
TCATCTCAGAATAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (508-573)

• Response regulator receiver domain (Response_reg) (773-883)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (622-731)

• HAMP domain (HAMP) (423-475)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	94.562	100	0.946