Detailed information NTG0853131

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QYQ96_RS01105
• Genome accession: NZ_CP129421
• Coordinates: 234059..235108 (+)
• Length: 349 a.a.
• NCBI ID: WP_304572391.1
• Uniprot ID: -
• Organism: Vibrio metoecus strain ZF102
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 229059..240108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYQ96_RS01085 (QYQ96_01085)	metJ	229124..229441 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
QYQ96_RS01090 (QYQ96_01090)	-	229528..230805 (-)	1278	WP_055029186.1	malic enzyme-like NAD(P)-binding protein	-
QYQ96_RS01095 (QYQ96_01095)	rpmE	231116..231334 (-)	219	WP_000643443.1	50S ribosomal protein L31	-
QYQ96_RS01100 (QYQ96_01100)	priA	231589..233793 (+)	2205	WP_304572390.1	primosomal protein N'	-
QYQ96_RS01105 (QYQ96_01105)	cytR	234059..235108 (+)	1050	WP_304572391.1	DNA-binding transcriptional regulator CytR	Regulator
QYQ96_RS01110 (QYQ96_01110)	-	235276..235824 (+)	549	WP_000013359.1	SPOR domain-containing protein	-
QYQ96_RS01115 (QYQ96_01115)	hslV	235959..236510 (+)	552	WP_000208248.1	ATP-dependent protease subunit HslV	-
QYQ96_RS01120 (QYQ96_01120)	hslU	236567..237901 (+)	1335	WP_001293364.1	HslU--HslV peptidase ATPase subunit	-
QYQ96_RS01125 (QYQ96_01125)	-	238008..238925 (+)	918	WP_001066161.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QYQ96_RS01130 (QYQ96_01130)	rraA	239000..239515 (+)	516	WP_000456238.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 38662.45 Da
• Isoelectric Point: 7.9889

>NTDB_id=853131 QYQ96_RS01105 WP_304572391.1 234059..235108(+) (cytR) [Vibrio metoecus strain ZF102]
MGSHHRIKTRGSKEMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIV
PDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACE
FAPELELPTVHIDNLTSAFEAVNYLTQLGHKRVAQISGPQNAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAK
AVRQLLSLPEQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLEL
LRGHDVRAGSRLLETKLMVRESAAPPNKK

Nucleotide

• Length: 1050 bp

>NTDB_id=853131 QYQ96_RS01105 WP_304572391.1 234059..235108(+) (cytR) [Vibrio metoecus strain ZF102]
ATGGGATCCCATCACCGAATCAAGACAAGAGGGTCAAAAGAAATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGT
TTCAACCGCGACGGTGTCGCGTGCGTTGATGAATCCTGAGAAAGTTTCTTCATCGACGCGTAAGCGTGTTGAAGAGGCGG
TGCTGGAAGCGGGTTACTCACCGAATTCTTTAGCGCGCAATTTGCGTCGTAATGAGTCAAAAACCATCGTTGCTATCGTG
CCGGATATCTGTGATCCCTACTTTTCTGAGATCATTCGTGGGATTGAAGATGCGGCAATGGAGCACGGTTATTTGGTGTT
ATTGGGTGATAGTGGCCAGCAAAAGCGTCGGGAAAACTCCTTCGTTAATCTGGTGTTTACCAAACAAGCTGACGGGATGC
TGCTACTTGGCACGGATTTGCCATTTGATGTCAGTAAACCTGAACAGAAAAACCTGCCGCCAATGGTGATGGCATGTGAA
TTCGCCCCCGAACTTGAGCTGCCTACCGTTCACATTGATAACCTGACTTCAGCGTTTGAAGCAGTGAACTACTTGACCCA
ACTGGGGCATAAGCGTGTGGCGCAGATTTCTGGCCCTCAAAATGCTGCATTGTGTCAATTCCGTCATCAAGGCTATCAAC
AGGCGCTACGTCGTGCTGGCATCACCATGAACCCGACTTACTGCACTTTTGGCGATTTCACTTTTGAAGCCGGGGCGAAA
GCGGTGCGTCAGCTCTTATCGTTACCGGAGCAGCCTACCGCGATTTTCTGCCACAATGACACGATGGCAATCGGTGCGAT
TCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCGCAAGATCTGTCGGTTGTCGGTTTTGATGATATTCAGTTTGCACAAT
ACTGCGATCCTCCATTGACGACGATTTCTCAACCTCGCTATGAAATTGGCCGCCAAGCCATGCTAATGATGTTAGAACTT
CTGCGTGGACACGATGTACGTGCCGGTTCTCGTTTGTTAGAAACCAAACTCATGGTGCGCGAGAGTGCCGCGCCACCCAA
CAAGAAATAG

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (17-62)

• Periplasmic binding protein-like domain (Peripla_BP_3) (182-342)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	98.507	95.989	0.946
cytR	Vibrio parahaemolyticus RIMD 2210633	90.12	95.702	0.862