Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   V6T26_RS05395 Genome accession   NZ_CP145858
Coordinates   1185351..1185833 (-) Length   160 a.a.
NCBI ID   WP_410541041.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS11     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1180351..1190833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6T26_RS05380 (V6T26_05380) lepB 1182265..1182822 (-) 558 WP_037597744.1 signal peptidase I -
  V6T26_RS05385 (V6T26_05385) - 1182944..1184173 (-) 1230 WP_410541040.1 tetratricopeptide repeat protein -
  V6T26_RS05390 (V6T26_05390) - 1184163..1185341 (-) 1179 WP_004182599.1 AI-2E family transporter -
  V6T26_RS05395 (V6T26_05395) mutX 1185351..1185833 (-) 483 WP_410541041.1 NUDIX hydrolase Machinery gene
  V6T26_RS05400 (V6T26_05400) ftsX 1185989..1186918 (-) 930 WP_110981213.1 permease-like cell division protein FtsX -
  V6T26_RS05405 (V6T26_05405) ftsE 1186911..1187603 (-) 693 WP_013990672.1 cell division ATP-binding protein FtsE -
  V6T26_RS05415 (V6T26_05415) queG 1188841..1189959 (-) 1119 WP_049554308.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18779.13 Da        Isoelectric Point: 4.4433

>NTDB_id=853063 V6T26_RS05395 WP_410541041.1 1185351..1185833(-) (mutX) [Streptococcus salivarius strain KSS11]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=853063 V6T26_RS05395 WP_410541041.1 1185351..1185833(-) (mutX) [Streptococcus salivarius strain KSS11]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCCGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCATATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTACGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTAGTAGACAAGAGTGTCACTTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725