Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QYE83_RS01325 Genome accession   NZ_CP129372
Coordinates   320801..321466 (+) Length   221 a.a.
NCBI ID   WP_070853629.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain CCSH-141     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 315801..326466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYE83_RS01310 - 317157..318701 (+) 1545 WP_002447008.1 NAD(P)H-binding protein -
  QYE83_RS01315 - 318825..320294 (-) 1470 WP_002447009.1 alkaline phosphatase -
  QYE83_RS01320 - 320591..320770 (+) 180 WP_070853630.1 hypothetical protein -
  QYE83_RS01325 braR 320801..321466 (+) 666 WP_070853629.1 response regulator transcription factor Regulator
  QYE83_RS01330 braS 321472..322368 (+) 897 WP_002458293.1 sensor histidine kinase Regulator
  QYE83_RS01335 - 322479..323228 (+) 750 WP_002458292.1 ABC transporter ATP-binding protein -
  QYE83_RS01340 - 323230..325242 (+) 2013 WP_002495980.1 FtsX-like permease family protein -
  QYE83_RS01345 - 325346..325936 (+) 591 WP_002447015.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25582.68 Da        Isoelectric Point: 5.1832

>NTDB_id=852876 QYE83_RS01325 WP_070853629.1 320801..321466(+) (braR) [Staphylococcus epidermidis strain CCSH-141]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEIRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDNLIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=852876 QYE83_RS01325 WP_070853629.1 320801..321466(+) (braR) [Staphylococcus epidermidis strain CCSH-141]
ATGAAGATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
TCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCAGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATACGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATTCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCGAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGTTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAGTATGTAAGTCGTACAGCTTTAATTGAGAAATGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTAGCAGTAAATATGACGAGATTACGAAAAAAATTACTTTCTATCGGTGTCGATAATTTAATTGAGACAA
AGAAAAATGTAGGATACAAGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.638

100

0.796