Detailed information NTG0852821

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QYE85_RS06010
• Genome accession: NZ_CP129365
• Coordinates: 1251266..1252240 (+)
• Length: 324 a.a.
• NCBI ID: WP_001831109.1
• Uniprot ID: A0A9Q5JKD6
• Organism: Staphylococcus epidermidis strain CKFA-393
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1246266..1257240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYE85_RS05975	rpmG	1246746..1246895 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
QYE85_RS05980	-	1247078..1247629 (+)	552	WP_001831001.1	5-formyltetrahydrofolate cyclo-ligase	-
QYE85_RS05985	-	1247630..1249090 (+)	1461	WP_001832757.1	rhomboid family intramembrane serine protease	-
QYE85_RS05990	-	1249074..1249274 (+)	201	WP_001831138.1	YqgQ family protein	-
QYE85_RS05995	-	1249274..1250260 (+)	987	WP_001831113.1	ROK family glucokinase	-
QYE85_RS06000	-	1250260..1250586 (+)	327	WP_001831234.1	MTH1187 family thiamine-binding protein	-
QYE85_RS06005	-	1250586..1251209 (+)	624	WP_001831016.1	MBL fold metallo-hydrolase	-
QYE85_RS06010	comGA	1251266..1252240 (+)	975	WP_001831109.1	competence type IV pilus ATPase ComGA	Machinery gene
QYE85_RS06015	comGB	1252212..1253279 (+)	1068	WP_001831131.1	competence type IV pilus assembly protein ComGB	Machinery gene
QYE85_RS06020	comGC	1253297..1253614 (+)	318	WP_001831271.1	competence type IV pilus major pilin ComGC	Machinery gene
QYE85_RS06025	comGD	1253604..1254041 (+)	438	WP_001831025.1	competence type IV pilus minor pilin ComGD	-
QYE85_RS06030	-	1254028..1254321 (+)	294	WP_001831116.1	hypothetical protein	-
QYE85_RS06035	-	1254245..1254736 (+)	492	WP_002440043.1	competence type IV pilus minor pilin ComGF	-
QYE85_RS06040	-	1254901..1255413 (+)	513	WP_002440040.1	shikimate kinase	-
QYE85_RS06045	gcvT	1255631..1256722 (+)	1092	WP_001831107.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37330.44 Da
• Isoelectric Point: 8.8174

>NTDB_id=852821 QYE85_RS06010 WP_001831109.1 1251266..1252240(+) (comGA) [Staphylococcus epidermidis strain CKFA-393]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=852821 QYE85_RS06010 WP_001831109.1 1251266..1252240(+) (comGA) [Staphylococcus epidermidis strain CKFA-393]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.062	100	0.701
comGA	Staphylococcus aureus N315	70.062	100	0.701