Detailed information NTG0852812

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S24_RS02400
• Genome accession: NZ_CP145718
• Coordinates: 187934..188917 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S1-CAM-01-C
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 182934..193917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S24_RS02385 (V6S24_02385)	dppA	184077..185684 (+)	1608	WP_073528260.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S24_RS02390 (V6S24_02390)	dppB	185992..187011 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S24_RS02395 (V6S24_02395)	dppC	187021..187923 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S24_RS02400 (V6S24_02400)	amiE	187934..188917 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S24_RS02405 (V6S24_02405)	dppF	188914..189918 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S24_RS02410 (V6S24_02410)	yhjV	189948..191219 (-)	1272	WP_260232497.1	amino acid permease	-
V6S24_RS02415 (V6S24_02415)	ldrD	191695..191802 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
V6S24_RS02420 (V6S24_02420)	bcsG	191889..193558 (-)	1670	Protein_181	cellulose biosynthesis protein BcsG	-
V6S24_RS02425 (V6S24_02425)	bcsF	193555..193746 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=852812 V6S24_RS02400 WP_001196486.1 187934..188917(+) (amiE) [Escherichia coli strain S1-CAM-01-C]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=852812 V6S24_RS02400 WP_001196486.1 187934..188917(+) (amiE) [Escherichia coli strain S1-CAM-01-C]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404