Detailed information NTG0852525

Bioinformatically predicted

Overview

• Name: pilJ
• Type: Machinery gene
• Locus tag: QYR08_RS02380
• Genome accession: NZ_CP129343
• Coordinates: 492233..494842 (+)
• Length: 869 a.a.
• NCBI ID: WP_010871656.1
• Uniprot ID: -
• Organism: Synechocystis sp. PCC 6803 substr. GT-T strain PCC 6803 isolate DELrpoZ-S1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 487233..499842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYR08_RS02360 (QYR08_02350)	-	487570..489480 (+)	1911	WP_014407070.1	AMP-dependent synthetase/ligase	-
QYR08_RS02365 (QYR08_02355)	-	489825..490991 (+)	1167	WP_010871653.1	response regulator	-
QYR08_RS02370 (QYR08_02360)	pilH	491187..491552 (+)	366	WP_014407071.1	response regulator transcription factor	Machinery gene
QYR08_RS02375 (QYR08_02365)	-	491599..492162 (+)	564	WP_010871655.1	chemotaxis protein CheW	-
QYR08_RS02380 (QYR08_02370)	pilJ	492233..494842 (+)	2610	WP_010871656.1	methyl-accepting chemotaxis protein	Machinery gene
QYR08_RS02385 (QYR08_02375)	-	494931..495722 (+)	792	WP_010871657.1	ABC transporter permease	-
QYR08_RS02390 (QYR08_02380)	-	495852..496109 (+)	258	WP_041425909.1	TatA/E family twin arginine-targeting protein translocase	-
QYR08_RS02395 (QYR08_02385)	-	496553..497947 (+)	1395	WP_010871659.1	sensor domain-containing diguanylate cyclase	-
QYR08_RS02400 (QYR08_02390)	-	498009..498176 (+)	168	WP_158299069.1	hypothetical protein	-

Sequence

Protein

• Length: 869 a.a.
• Molecular weight: 93209.76 Da
• Isoelectric Point: 4.0166

>NTDB_id=852525 QYR08_RS02380 WP_010871656.1 492233..494842(+) (pilJ) [Synechocystis sp. PCC 6803 substr. GT-T strain PCC 6803 isolate DELrpoZ-S1]
MATETNFSQLYGLAYAAYGQGNYQEASSHIEQLAADFPEDPNVLLLRGHIYVGLEQYALAHQAYQGVIRFSDRQDLIDCA
NQALGQIQEEEPRGNGAKDSLDQDWQSDIDAIDNSMAWETGVFTEEDFGEPTLGRAPSPTNPGMDHPFGRSSASFGTSGA
RSYEIENLDWSPEAFTDDLDSDDEQTMMPQTGESTFVVPPAFGEGIADFADLAADVSSAGIGGTDGAEYPPYQTWDGGDW
SEALGLDDPEALAQAPTPTSGDYGAGNNLPSFDAFEEGVEDELSDFNLTDIAPELPDSSLFSQATNLDIGAVGRIDDTQG
GDTVVHGGNAAPPGMATWLKPDGAATGDLSSATSPFNDRPTSEVDAGFLGWFTNASLFRKQIYMAIASGVFSGFAVLVLG
SIVGLGGTPKDVPAPSGETTTEAPAEGAPAEGQAPSQTPEEEPGKPSLLNLAFLTAIATAIGVFLINRLLMQQIKSIIDD
LQNQFESIYEGNFNVRAKVRSEDELGALTQRFNYISQVILTATSEAQERAATTEKVREKLQRQVIRLLDDVEGASRGDLT
VQAEVTADELGAVADAFNLTIQNLREIVLQVKNAAKQVNNNCKDSESFARNNSSDALRMAEELAVTLNSVQLMTESIERV
AENAREAEEVAHTSSLTALKGGEAVERTVGGILQIRETVSETARKVKRLAEASQEISKIVAVISQIASRTNLLALNASIQ
AARAGEAGRGFAIVADEVRQLADRSAKSLKEIEQIVLQIQSETGSVMTAMEEGIQQVIDVTDKSEQSKRALEDIIEVSNR
INTLVRSITADTVKQQENSGAVSNVMQSIELTAQETSQESQRVAGSLQTLVSISRDLLTSVERFRVESR

Nucleotide

• Length: 2610 bp

>NTDB_id=852525 QYR08_RS02380 WP_010871656.1 492233..494842(+) (pilJ) [Synechocystis sp. PCC 6803 substr. GT-T strain PCC 6803 isolate DELrpoZ-S1]
ATGGCAACAGAAACCAATTTTTCGCAGCTTTATGGGTTGGCCTACGCCGCCTATGGACAGGGGAATTATCAAGAAGCTTC
TTCCCATATTGAACAATTGGCCGCTGATTTTCCCGAAGATCCTAATGTATTGTTGCTCCGGGGGCATATCTATGTCGGCC
TGGAACAATACGCCCTAGCCCACCAGGCTTATCAGGGGGTAATTCGGTTTTCCGATCGCCAAGACTTAATTGACTGCGCT
AACCAGGCCCTAGGGCAAATCCAAGAAGAGGAACCAAGGGGCAACGGAGCCAAAGATTCCCTTGACCAGGATTGGCAAAG
TGACATCGATGCCATTGACAATTCCATGGCCTGGGAAACAGGAGTGTTCACCGAAGAGGATTTCGGCGAGCCCACTTTGG
GCCGGGCCCCCAGCCCCACTAATCCGGGCATGGACCATCCCTTTGGCCGCAGCTCTGCTTCCTTTGGTACCAGTGGGGCC
AGGAGTTACGAAATTGAAAACCTAGATTGGAGTCCGGAAGCTTTCACCGATGACCTGGACTCCGATGATGAACAGACCAT
GATGCCCCAAACTGGCGAGTCTACTTTTGTGGTGCCACCGGCCTTTGGTGAAGGGATAGCGGATTTTGCCGATTTAGCGG
CGGATGTCTCCTCAGCCGGCATTGGCGGGACAGATGGTGCCGAATATCCCCCATATCAAACTTGGGACGGGGGCGACTGG
AGTGAAGCTCTCGGTTTGGATGATCCTGAAGCCTTGGCTCAGGCCCCTACCCCCACCTCTGGCGATTACGGCGCTGGCAA
TAACCTACCGAGTTTTGATGCGTTTGAGGAAGGGGTGGAGGATGAGTTGTCCGATTTTAACCTGACGGATATTGCCCCAG
AGTTGCCCGATTCTTCCCTCTTTAGCCAAGCCACTAATTTGGACATAGGTGCGGTGGGTCGCATCGATGACACCCAGGGC
GGTGATACGGTGGTCCATGGAGGTAATGCAGCGCCACCGGGCATGGCCACTTGGTTGAAACCGGATGGGGCCGCCACCGG
GGATTTATCCAGCGCCACTAGTCCCTTTAATGACCGGCCCACCAGTGAGGTAGATGCGGGTTTTCTCGGTTGGTTCACCA
ATGCTTCCCTGTTTAGAAAGCAGATTTACATGGCGATCGCCTCCGGTGTGTTTTCCGGGTTCGCGGTGTTGGTATTGGGA
AGCATAGTGGGTTTAGGGGGAACTCCCAAAGACGTACCTGCTCCTTCAGGGGAAACCACCACCGAAGCTCCAGCAGAAGG
TGCCCCCGCAGAGGGCCAGGCCCCTTCCCAGACCCCAGAGGAAGAACCGGGCAAACCATCCCTCCTCAACCTCGCCTTCC
TCACAGCCATAGCCACGGCGATCGGAGTCTTTCTGATCAATCGATTGCTGATGCAACAGATTAAGAGTATTATCGACGAC
CTGCAAAATCAGTTTGAATCCATCTATGAGGGCAATTTCAATGTCCGGGCCAAGGTGCGATCGGAGGATGAATTGGGGGC
TTTGACCCAACGGTTTAACTATATTTCCCAAGTTATTCTCACGGCCACTAGTGAAGCCCAGGAACGGGCTGCTACCACCG
AAAAAGTGCGGGAAAAATTACAGCGCCAAGTAATTCGGCTCCTGGACGATGTAGAGGGAGCTTCCCGGGGAGATTTAACC
GTACAAGCGGAAGTAACGGCGGATGAGCTGGGAGCGGTGGCCGATGCCTTTAACCTAACTATCCAAAACCTGCGGGAGAT
TGTGTTACAAGTTAAAAATGCCGCCAAGCAGGTGAATAACAACTGTAAAGACAGTGAGTCCTTTGCCCGCAATAACTCCA
GCGATGCGTTGCGAATGGCGGAGGAATTGGCCGTCACCCTCAACTCTGTTCAGTTAATGACGGAATCCATTGAACGGGTA
GCAGAAAACGCCCGGGAAGCGGAGGAAGTGGCCCATACTTCATCTTTAACTGCCCTCAAAGGTGGGGAAGCGGTGGAAAG
AACGGTGGGGGGCATTCTGCAAATTCGGGAAACGGTGTCGGAAACTGCCCGCAAGGTAAAACGGTTAGCGGAAGCATCCC
AGGAAATTTCCAAAATTGTGGCGGTTATTTCCCAAATTGCCTCCCGGACTAACCTGTTAGCTTTGAACGCCTCCATCCAG
GCGGCCCGGGCAGGGGAAGCAGGGCGGGGCTTTGCCATCGTTGCAGACGAGGTGCGACAGTTGGCGGATCGTTCTGCTAA
GTCGTTGAAGGAAATTGAGCAAATCGTTTTGCAAATTCAGAGTGAAACCGGCTCCGTAATGACCGCCATGGAAGAAGGTA
TCCAACAGGTAATCGACGTAACTGACAAGTCGGAACAGTCGAAACGGGCCCTGGAGGATATTATTGAGGTGTCTAATCGG
ATTAACACTTTGGTGCGTTCCATTACTGCTGATACCGTCAAGCAGCAGGAGAACTCCGGTGCAGTGTCCAACGTCATGCA
GTCCATTGAGCTGACGGCCCAGGAAACTTCCCAGGAATCTCAACGGGTAGCAGGATCTTTGCAAACCCTGGTCTCCATTT
CCCGCGACCTGTTAACTTCGGTGGAACGGTTCCGGGTGGAAAGTCGCTAG

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (555-586)

• HAMP domain (HAMP) (473-514)

• Methyl-accepting chemotaxis protein (MCP) signalling domain (MCPsignal) (649-830)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilJ	Synechocystis sp. PCC 6803	100	100	1