Detailed information NTG0852491

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S28_RS01535
• Genome accession: NZ_CP145700
• Coordinates: 180257..181240 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S1-IVC-02-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 175257..186240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S28_RS01520 (V6S28_01520)	dppA	176557..178164 (+)	1608	WP_001222881.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S28_RS01525 (V6S28_01525)	dppB	178315..179334 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S28_RS01530 (V6S28_01530)	dppC	179344..180246 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S28_RS01535 (V6S28_01535)	amiE	180257..181240 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S28_RS01540 (V6S28_01540)	dppF	181237..182241 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S28_RS01545 (V6S28_01545)	yhjV	182271..183542 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
V6S28_RS01550 (V6S28_01550)	ldrD	184018..184125 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
V6S28_RS01555 (V6S28_01555)	-	184501..184608 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=852491 V6S28_RS01535 WP_001196486.1 180257..181240(+) (amiE) [Escherichia coli strain S1-IVC-02-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=852491 V6S28_RS01535 WP_001196486.1 180257..181240(+) (amiE) [Escherichia coli strain S1-IVC-02-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404