Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QYM22_RS06790 Genome accession   NZ_CP129342
Coordinates   1328163..1329122 (+) Length   319 a.a.
NCBI ID   WP_046131230.1    Uniprot ID   A0AAE2EN00
Organism   Bacillus glycinifermentans strain SRCM12603     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1323163..1334122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYM22_RS06765 (QYM22_06765) argF 1324995..1325933 (+) 939 WP_046131235.1 ornithine carbamoyltransferase -
  QYM22_RS06770 (QYM22_06770) - 1326037..1326216 (+) 180 WP_046131234.1 YjzC family protein -
  QYM22_RS06775 (QYM22_06775) - 1326250..1326435 (-) 186 WP_046131233.1 YjzD family protein -
  QYM22_RS06780 (QYM22_06780) - 1326672..1327406 (+) 735 WP_046131232.1 hypothetical protein -
  QYM22_RS06785 (QYM22_06785) - 1327500..1328075 (+) 576 WP_046131231.1 hypothetical protein -
  QYM22_RS06790 (QYM22_06790) med 1328163..1329122 (+) 960 WP_046131230.1 BMP family ABC transporter substrate-binding protein Regulator
  QYM22_RS06795 (QYM22_06795) comZ 1329128..1329316 (+) 189 WP_046131321.1 ComZ family protein Regulator
  QYM22_RS06800 (QYM22_06800) - 1329361..1329618 (-) 258 WP_046131229.1 hypothetical protein -
  QYM22_RS06805 (QYM22_06805) - 1329786..1330724 (+) 939 WP_046131228.1 beta-ketoacyl-ACP synthase III -
  QYM22_RS06810 (QYM22_06810) fabF 1330746..1331984 (+) 1239 WP_046131227.1 beta-ketoacyl-ACP synthase II -
  QYM22_RS06815 (QYM22_06815) - 1332070..1332858 (+) 789 WP_046131226.1 DUF2268 domain-containing protein -
  QYM22_RS06820 (QYM22_06820) - 1333039..1334013 (+) 975 WP_046131225.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35221.27 Da        Isoelectric Point: 5.9861

>NTDB_id=852470 QYM22_RS06790 WP_046131230.1 1328163..1329122(+) (med) [Bacillus glycinifermentans strain SRCM12603]
MVYRLVVIFLMLLAMCGCGQASLNGKIEKVGLLVPDTISDQVWGTKGYKGLLRIQSVYGVDVYYKEGIDNEAAIKMAVDD
FQKKGVNLIFGHGSEYEKVFNRISGDYPGIHFVLVNSKAEHKNVTSIDFDGRAMGFFGGMTAAHQSKSGKLGILATHSWQ
PEVKGFIEGAKYVNPDISVMTEYVGQWDDSEKAVQKYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDEAYELIAGEFNKGTLKGGRRVFDIQDGVIEMGEFSPVVDQAFQKKIKGLIEQYKKTGKLPDENVR

Nucleotide


Download         Length: 960 bp        

>NTDB_id=852470 QYM22_RS06790 WP_046131230.1 1328163..1329122(+) (med) [Bacillus glycinifermentans strain SRCM12603]
ATGGTATACAGGCTTGTCGTGATTTTTTTGATGCTCCTTGCGATGTGCGGCTGCGGACAAGCATCGCTGAACGGGAAGAT
TGAAAAGGTCGGGTTGCTTGTCCCTGATACAATAAGCGATCAAGTATGGGGAACCAAAGGATATAAAGGACTATTAAGAA
TACAGTCTGTCTACGGTGTCGATGTCTATTATAAAGAAGGAATCGATAATGAAGCGGCTATCAAAATGGCCGTAGACGAT
TTTCAGAAAAAAGGCGTCAATTTAATTTTCGGGCATGGAAGCGAATATGAAAAAGTGTTTAATCGTATAAGCGGAGACTA
TCCCGGCATTCATTTCGTCTTGGTTAACAGCAAAGCCGAGCATAAAAATGTGACCAGCATCGACTTTGACGGAAGGGCGA
TGGGCTTTTTCGGCGGCATGACCGCCGCACACCAATCAAAGTCAGGAAAACTCGGCATACTTGCAACGCATAGCTGGCAG
CCTGAAGTCAAAGGGTTTATCGAAGGCGCCAAATATGTGAATCCAGACATTTCGGTCATGACAGAGTATGTGGGACAGTG
GGATGACTCCGAAAAGGCCGTTCAAAAGTACGAAAAAATGAAAAAAGCGGGCGCCGATGTTGTATATCCGGCGGGAGATG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAAGACGGACTATACGCCATAGGCTATGTAAGCGACCAGTCGGAGCTG
GGGGAGAACGTCGTCCTGACGAGCACCATCCAGCATGTTGACGAAGCTTATGAACTGATCGCCGGCGAATTCAATAAAGG
AACGCTCAAGGGAGGCCGGCGGGTCTTTGACATTCAGGACGGCGTCATCGAAATGGGCGAATTCAGCCCGGTTGTCGATC
AAGCCTTCCAGAAAAAAATCAAAGGACTTATTGAACAATATAAAAAAACGGGAAAACTGCCGGATGAAAACGTGAGGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

65.605

98.433

0.646