Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QYM22_RS02565 Genome accession   NZ_CP129342
Coordinates   510364..511317 (+) Length   317 a.a.
NCBI ID   WP_046131077.1    Uniprot ID   A0AAE2JVL8
Organism   Bacillus glycinifermentans strain SRCM12603     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 505364..516317
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYM22_RS02550 (QYM22_02550) - 505439..506863 (+) 1425 WP_046131080.1 HAMP domain-containing sensor histidine kinase -
  QYM22_RS02555 (QYM22_02555) - 506902..508620 (-) 1719 WP_046131079.1 methyl-accepting chemotaxis protein -
  QYM22_RS02560 (QYM22_02560) - 508731..510092 (-) 1362 WP_046131078.1 aspartate kinase -
  QYM22_RS02565 (QYM22_02565) ceuB 510364..511317 (+) 954 WP_046131077.1 ABC transporter permease Machinery gene
  QYM22_RS02570 (QYM22_02570) - 511307..512251 (+) 945 WP_046131076.1 iron chelate uptake ABC transporter family permease subunit -
  QYM22_RS02575 (QYM22_02575) - 512251..513009 (+) 759 WP_046131075.1 ABC transporter ATP-binding protein -
  QYM22_RS02580 (QYM22_02580) - 513029..513967 (+) 939 WP_046131091.1 siderophore ABC transporter substrate-binding protein -
  QYM22_RS02585 (QYM22_02585) - 514060..514887 (-) 828 WP_046131074.1 isocitrate lyase/phosphoenolpyruvate mutase family protein -
  QYM22_RS02590 (QYM22_02590) - 514996..515733 (-) 738 WP_046131073.1 NADPH-dependent oxidoreductase -
  QYM22_RS02595 (QYM22_02595) - 515756..516040 (-) 285 WP_046131072.1 putative quinol monooxygenase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35070.34 Da        Isoelectric Point: 9.6738

>NTDB_id=852461 QYM22_RS02565 WP_046131077.1 510364..511317(+) (ceuB) [Bacillus glycinifermentans strain SRCM12603]
MKLRYLLLLLIILCFSSIFIGVKQLSPLDLFRLNEDDIQTLYISRLPRMISIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGVIISIMLFSSAGIVVKIVFACAFSLFGSFLFLKILDSIRFKDAVFIPLVGLMLGGVVSAISTFIAYQYDLI
QNVNAWFEGNFSLVMKGRYELLYLSIPLVIIAYLFANKFTVAGMGESFSVNLGLNYQRVINIGLIIVSVISSVVILTVGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAVLGAVFVLFCDILGRLIIYPYEISVGLMVGIIGSGVFLYLLLRRKAYGF

Nucleotide


Download         Length: 954 bp        

>NTDB_id=852461 QYM22_RS02565 WP_046131077.1 510364..511317(+) (ceuB) [Bacillus glycinifermentans strain SRCM12603]
ATGAAATTGCGGTATTTACTGCTTCTGCTCATCATTCTTTGTTTCAGTTCAATTTTTATCGGCGTCAAACAACTGTCACC
CCTTGATCTATTCAGATTGAACGAGGATGACATTCAGACGCTGTACATAAGCCGGCTTCCGCGAATGATCAGCATCGTGC
TTGCGGGAATGAGCCTGAGCATTTGCGGGCTGATTATGCAGCAGCTGACCCGCAATAAATTCGTCTCGCCGACGACGGCT
GGGACGATGGATTGGGCAAGGCTCGGCGTCATCATTTCGATAATGCTGTTTTCTTCAGCGGGCATAGTTGTAAAGATTGT
GTTTGCCTGTGCTTTTTCGCTGTTCGGCAGCTTTTTGTTTCTTAAGATTTTGGACAGCATCAGATTTAAGGACGCGGTGT
TTATTCCGCTCGTCGGTTTGATGCTTGGGGGCGTTGTCAGTGCCATTTCCACGTTCATAGCGTATCAGTACGACCTGATT
CAAAACGTCAATGCGTGGTTTGAGGGGAATTTCTCGCTTGTCATGAAAGGAAGGTATGAGCTGTTATACTTGAGCATTCC
GCTCGTCATCATCGCCTACCTGTTTGCCAATAAATTTACGGTGGCCGGGATGGGCGAGAGCTTCTCAGTCAATCTGGGGC
TGAATTATCAGCGGGTGATCAACATCGGCCTGATCATTGTTTCGGTCATCTCGTCAGTCGTCATTTTGACGGTCGGGACG
CTTCCTTTCCTCGGGCTGATCATTCCGAATATCGTTTCGATTTATCGCGGAGACCATTTGAAAAACAGCCTGCCTCACAC
GGCGGTTCTCGGCGCCGTCTTTGTCCTGTTTTGTGACATATTGGGCCGGCTGATCATTTATCCTTATGAAATCTCGGTCG
GCCTGATGGTCGGCATCATCGGAAGCGGCGTTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGGATTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.316

99.685

0.502