Detailed information NTG0852450

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S29_RS14550
• Genome accession: NZ_CP145698
• Coordinates: 2849780..2850763 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S1-KEN-03-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2844780..2855763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S29_RS14535 (V6S29_14535)	dppA	2846080..2847687 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S29_RS14540 (V6S29_14540)	dppB	2847838..2848857 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S29_RS14545 (V6S29_14545)	dppC	2848867..2849769 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S29_RS14550 (V6S29_14550)	amiE	2849780..2850763 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S29_RS14555 (V6S29_14555)	dppF	2850760..2851764 (+)	1005	WP_000107024.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S29_RS14560 (V6S29_14560)	yhjV	2851794..2853065 (-)	1272	WP_247161304.1	amino acid permease	-
V6S29_RS14565 (V6S29_14565)	-	2853541..2853648 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S29_RS14570 (V6S29_14570)	-	2854024..2854131 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S29_RS14575 (V6S29_14575)	-	2854507..2854614 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=852450 V6S29_RS14550 WP_001196486.1 2849780..2850763(+) (amiE) [Escherichia coli strain S1-KEN-03-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=852450 V6S29_RS14550 WP_001196486.1 2849780..2850763(+) (amiE) [Escherichia coli strain S1-KEN-03-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404