Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QYC34_RS07610 Genome accession   NZ_CP129338
Coordinates   1456405..1457061 (+) Length   218 a.a.
NCBI ID   WP_015252354.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM126725     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1451405..1462061
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYC34_RS07580 (QYC34_07580) oppF 1451658..1452575 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  QYC34_RS07585 (QYC34_07585) yjbB 1452682..1453899 (+) 1218 WP_080019554.1 MFS transporter -
  QYC34_RS07590 (QYC34_07590) yjbC 1454063..1454641 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  QYC34_RS07595 (QYC34_07595) spx 1454822..1455217 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  QYC34_RS07600 (QYC34_07600) yjbE 1455472..1456128 (-) 657 WP_038828809.1 TerC family protein -
  QYC34_RS07605 (QYC34_07605) - 1456298..1456438 (+) 141 WP_119122854.1 hypothetical protein -
  QYC34_RS07610 (QYC34_07610) mecA 1456405..1457061 (+) 657 WP_015252354.1 adaptor protein MecA Regulator
  QYC34_RS07615 (QYC34_07615) - 1457056..1457178 (-) 123 WP_021479547.1 hypothetical protein -
  QYC34_RS07620 (QYC34_07620) coiA 1457252..1458373 (+) 1122 WP_015252353.1 competence protein CoiA Machinery gene
  QYC34_RS07625 (QYC34_07625) pepF 1458603..1460432 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  QYC34_RS07630 (QYC34_07630) - 1460470..1460637 (-) 168 WP_003244944.1 hypothetical protein -
  QYC34_RS07635 (QYC34_07635) spxH 1460951..1461850 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25716.53 Da        Isoelectric Point: 4.0841

>NTDB_id=852326 QYC34_RS07610 WP_015252354.1 1456405..1457061(+) (mecA) [Bacillus subtilis strain SRCM126725]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFGNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=852326 QYC34_RS07610 WP_015252354.1 1456405..1457061(+) (mecA) [Bacillus subtilis strain SRCM126725]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTGGCAATATGACTGATGAAGAGGTTGAAAATCAACTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

98.624

100

0.986