Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QYC34_RS05965 Genome accession   NZ_CP129338
Coordinates   1151468..1152262 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM126725     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1146468..1157262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYC34_RS05935 (QYC34_05935) sxzA 1147307..1148338 (+) 1032 WP_003243057.1 iron chelate uptake ABC transporter family permease subunit -
  QYC34_RS05940 (QYC34_05940) yfhB 1148453..1149334 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  QYC34_RS05945 (QYC34_05945) yfhC 1149422..1150006 (+) 585 WP_046160214.1 nitroreductase -
  QYC34_RS05950 (QYC34_05950) yfhD 1150045..1150236 (-) 192 WP_003233561.1 YfhD family protein -
  QYC34_RS05955 (QYC34_05955) yfhE 1150303..1150413 (-) 111 WP_003223230.1 YfhE family protein -
  QYC34_RS05960 (QYC34_05960) yfhF 1150468..1151379 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  QYC34_RS05965 (QYC34_05965) recX 1151468..1152262 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  QYC34_RS05970 (QYC34_05970) yfhH 1152264..1152578 (+) 315 WP_003244592.1 YfhH family protein -
  QYC34_RS05975 (QYC34_05975) yfhI 1152721..1153914 (+) 1194 WP_003243500.1 MFS transporter -
  QYC34_RS05980 (QYC34_05980) sspK 1153946..1154098 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  QYC34_RS05985 (QYC34_05985) yfhJ 1154223..1154492 (+) 270 WP_015252516.1 YfhJ family protein -
  QYC34_RS05990 (QYC34_05990) yfhK 1154637..1155155 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  QYC34_RS05995 (QYC34_05995) spdL 1155240..1155572 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  QYC34_RS06000 (QYC34_06000) ephM 1155559..1156419 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=852315 QYC34_RS05965 WP_003243354.1 1151468..1152262(+) (recX) [Bacillus subtilis strain SRCM126725]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=852315 QYC34_RS05965 WP_003243354.1 1151468..1152262(+) (recX) [Bacillus subtilis strain SRCM126725]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1