Detailed information NTG0852242

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S31_RS00860
• Genome accession: NZ_CP145689
• Coordinates: 182450..183433 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain S1-KEN-05-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 177450..188433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S31_RS00840 (V6S31_00840)	dppA	178594..180201 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S31_RS00845	-	180263..180490 (-)	228	WP_000198577.1	hypothetical protein	-
V6S31_RS00850 (V6S31_00845)	dppB	180508..181527 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S31_RS00855 (V6S31_00850)	dppC	181537..182439 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S31_RS00860 (V6S31_00855)	amiE	182450..183433 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S31_RS00865 (V6S31_00860)	dppF	183430..184443 (+)	1014	WP_000103572.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S31_RS00870 (V6S31_00865)	-	184668..184991 (+)	324	WP_000563102.1	helix-turn-helix transcriptional regulator	-
V6S31_RS00875 (V6S31_00870)	-	184976..185287 (+)	312	WP_001312177.1	HipA N-terminal domain-containing protein	-
V6S31_RS00880 (V6S31_00875)	-	185287..186294 (+)	1008	WP_001262467.1	HipA domain-containing protein	-
V6S31_RS00885 (V6S31_00880)	yhjV	186311..187582 (-)	1272	WP_001545666.1	amino acid permease	-
V6S31_RS00890 (V6S31_00885)	-	188058..188165 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=852242 V6S31_RS00860 WP_001196477.1 182450..183433(+) (amiE) [Escherichia coli strain S1-KEN-05-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=852242 V6S31_RS00860 WP_001196477.1 182450..183433(+) (amiE) [Escherichia coli strain S1-KEN-05-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404