Detailed information NTG0852223

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S32_RS22330
• Genome accession: NZ_CP145683
• Coordinates: 4549446..4550429 (-)
• Length: 327 a.a.
• NCBI ID: WP_001540025.1
• Uniprot ID: -
• Organism: Escherichia coli strain S1-KEN-07-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4544446..4555429

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S32_RS22305 (V6S32_22310)	bcsF	4544607..4544798 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
V6S32_RS22310 (V6S32_22315)	bcsG	4544795..4546474 (+)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
V6S32_RS22315 (V6S32_22320)	ldrD	4546561..4546668 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S32_RS22320 (V6S32_22325)	yhjV	4547144..4548415 (+)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
V6S32_RS22325 (V6S32_22330)	dppF	4548445..4549449 (-)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S32_RS22330 (V6S32_22335)	amiE	4549446..4550429 (-)	984	WP_001540025.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S32_RS22335 (V6S32_22340)	dppC	4550440..4551342 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S32_RS22340 (V6S32_22345)	dppB	4551352..4552371 (-)	1020	WP_001540029.1	dipeptide ABC transporter permease DppB	-
V6S32_RS22345 (V6S32_22350)	dppA	4552678..4554285 (-)	1608	WP_001774075.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35792.37 Da
• Isoelectric Point: 6.4944

>NTDB_id=852223 V6S32_RS22330 WP_001540025.1 4549446..4550429(-) (amiE) [Escherichia coli strain S1-KEN-07-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFQAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=852223 V6S32_RS22330 WP_001540025.1 4549446..4550429(-) (amiE) [Escherichia coli strain S1-KEN-07-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCAGGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404