Detailed information NTG0852031

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S34_RS17335
• Genome accession: NZ_CP145671
• Coordinates: 3524943..3525926 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S1-ZIM-01-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3519943..3530926

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S34_RS17320 (V6S34_17320)	dppA	3521243..3522850 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S34_RS17325 (V6S34_17325)	dppB	3523001..3524020 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
V6S34_RS17330 (V6S34_17330)	dppC	3524030..3524932 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S34_RS17335 (V6S34_17335)	amiE	3524943..3525926 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S34_RS17340 (V6S34_17340)	dppF	3525923..3526927 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S34_RS17345 (V6S34_17345)	yhjV	3526957..3528228 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
V6S34_RS17350 (V6S34_17350)	-	3528704..3528811 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S34_RS17355 (V6S34_17355)	-	3529187..3529294 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=852031 V6S34_RS17335 WP_001196486.1 3524943..3525926(+) (amiE) [Escherichia coli strain S1-ZIM-01-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=852031 V6S34_RS17335 WP_001196486.1 3524943..3525926(+) (amiE) [Escherichia coli strain S1-ZIM-01-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404