Detailed information NTG0851952

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S35_RS17340
• Genome accession: NZ_CP145668
• Coordinates: 3547344..3548327 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S1-CHI-01-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3542344..3553327

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S35_RS17325 (V6S35_17325)	dppA	3543644..3545251 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S35_RS17330 (V6S35_17330)	dppB	3545402..3546421 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
V6S35_RS17335 (V6S35_17335)	dppC	3546431..3547333 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S35_RS17340 (V6S35_17340)	amiE	3547344..3548327 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S35_RS17345 (V6S35_17345)	dppF	3548324..3549328 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S35_RS17350 (V6S35_17350)	yhjV	3549358..3550629 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
V6S35_RS17355 (V6S35_17355)	-	3551105..3551212 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S35_RS17360 (V6S35_17360)	-	3551588..3551695 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=851952 V6S35_RS17340 WP_001196486.1 3547344..3548327(+) (amiE) [Escherichia coli strain S1-CHI-01-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=851952 V6S35_RS17340 WP_001196486.1 3547344..3548327(+) (amiE) [Escherichia coli strain S1-CHI-01-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404