Detailed information NTG0851885

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: QWY26_RS10610
• Genome accession: NZ_CP129245
• Coordinates: 2227227..2227928 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain 13A297n
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2222227..2232928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QWY26_RS10580 (QWY26_10580)	-	2222534..2222977 (-)	444	WP_001246675.1	SRPBCC family protein	-
QWY26_RS10585 (QWY26_10585)	tadA	2223047..2223550 (-)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
QWY26_RS10590 (QWY26_10590)	-	2223557..2224681 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
QWY26_RS10595 (QWY26_10595)	ung	2224678..2225391 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
QWY26_RS10600 (QWY26_10600)	-	2225442..2226038 (-)	597	WP_000908450.1	6-carboxytetrahydropterin synthase	-
QWY26_RS10605 (QWY26_10605)	gspK	2226268..2227227 (-)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
QWY26_RS10610 (QWY26_10610)	xcpW	2227227..2227928 (-)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
QWY26_RS10615 (QWY26_10615)	xcpV	2227928..2228308 (-)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
QWY26_RS10620 (QWY26_10620)	-	2228298..2228852 (-)	555	WP_000841379.1	type II secretion system protein	-
QWY26_RS10625 (QWY26_10625)	-	2228862..2229470 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
QWY26_RS10630 (QWY26_10630)	-	2229508..2230281 (-)	774	WP_000497298.1	TatD family hydrolase	-
QWY26_RS10635 (QWY26_10635)	-	2230299..2230640 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
QWY26_RS10640 (QWY26_10640)	-	2230652..2231632 (-)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
QWY26_RS10645 (QWY26_10645)	kdsB	2231644..2232405 (-)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=851885 QWY26_RS10610 WP_000594572.1 2227227..2227928(-) (xcpW) [Acinetobacter baumannii strain 13A297n]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=851885 QWY26_RS10610 WP_000594572.1 2227227..2227928(-) (xcpW) [Acinetobacter baumannii strain 13A297n]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991