Detailed information NTG0851803

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S38_RS20655
• Genome accession: NZ_CP145662
• Coordinates: 4188707..4189690 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S1-INA-02-B
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4183707..4194690

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S38_RS20635 (V6S38_20635)	ldrD	4185340..4185447 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
V6S38_RS20640 (V6S38_20640)	-	4185822..4185929 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S38_RS20645 (V6S38_20645)	yhjV	4186405..4187676 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
V6S38_RS20650 (V6S38_20650)	dppF	4187706..4188710 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S38_RS20655 (V6S38_20655)	amiE	4188707..4189690 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S38_RS20660 (V6S38_20660)	dppC	4189701..4190603 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S38_RS20665 (V6S38_20665)	dppB	4190613..4191632 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S38_RS20670 (V6S38_20670)	-	4191796..4191906 (+)	111	Protein_4030	hypothetical protein	-
V6S38_RS20675 (V6S38_20675)	dppA	4191940..4193547 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=851803 V6S38_RS20655 WP_001196486.1 4188707..4189690(-) (amiE) [Escherichia coli strain S1-INA-02-B]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=851803 V6S38_RS20655 WP_001196486.1 4188707..4189690(-) (amiE) [Escherichia coli strain S1-INA-02-B]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404