Detailed information NTG0851698

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S40_RS13015
• Genome accession: NZ_CP145657
• Coordinates: 2632127..2633110 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain S1-IND-01-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2627127..2638110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S40_RS12990 (V6S40_12995)	-	2628276..2628383 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S40_RS12995 (V6S40_13000)	-	2628759..2628866 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S40_RS13000 (V6S40_13005)	-	2629242..2629349 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S40_RS13005 (V6S40_13010)	yhjV	2629825..2631096 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
V6S40_RS13010 (V6S40_13015)	dppF	2631126..2632130 (-)	1005	WP_000107018.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S40_RS13015 (V6S40_13020)	amiE	2632127..2633110 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S40_RS13020 (V6S40_13025)	dppC	2633121..2634023 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S40_RS13025 (V6S40_13030)	dppB	2634033..2635052 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S40_RS13030 (V6S40_13035)	dppA	2635360..2636967 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=851698 V6S40_RS13015 WP_001196486.1 2632127..2633110(-) (amiE) [Escherichia coli strain S1-IND-01-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=851698 V6S40_RS13015 WP_001196486.1 2632127..2633110(-) (amiE) [Escherichia coli strain S1-IND-01-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404