Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QWV57_RS07030 Genome accession   NZ_CP129217
Coordinates   1377349..1378296 (+) Length   315 a.a.
NCBI ID   WP_301101567.1    Uniprot ID   -
Organism   Geobacillus zalihae strain JS1-2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1372349..1383296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWV57_RS07015 (QWV57_07015) - 1373703..1374992 (+) 1290 WP_015374601.1 CitMHS family transporter -
  QWV57_RS07020 (QWV57_07020) - 1375036..1376346 (+) 1311 WP_015374602.1 acyclic terpene utilization AtuA family protein -
  QWV57_RS07025 (QWV57_07025) - 1376343..1376675 (+) 333 WP_020278755.1 hypothetical protein -
  QWV57_RS07030 (QWV57_07030) ceuB 1377349..1378296 (+) 948 WP_301101567.1 ABC transporter permease Machinery gene
  QWV57_RS07035 (QWV57_07035) - 1378289..1379239 (+) 951 WP_129447264.1 iron chelate uptake ABC transporter family permease subunit -
  QWV57_RS07040 (QWV57_07040) - 1379233..1379988 (+) 756 WP_015374606.1 ABC transporter ATP-binding protein -
  QWV57_RS07045 (QWV57_07045) - 1380657..1381616 (+) 960 WP_129447265.1 siderophore ABC transporter substrate-binding protein -
  QWV57_RS07050 (QWV57_07050) - 1381655..1382341 (-) 687 WP_015374608.1 hypothetical protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34544.42 Da        Isoelectric Point: 9.4681

>NTDB_id=851610 QWV57_RS07030 WP_301101567.1 1377349..1378296(+) (ceuB) [Geobacillus zalihae strain JS1-2]
MKKWMVLLVVLAAASLFVGVHDLSPRELFAGDREAWEVFLISRLPRLISILIAGSSVSICGLIMQQLSQNRFVSPTTAGT
MDWARLGLLVSMIAFAAAGPLVKAAIAVVFAFAGTLLFMTVLDRVKYKDSIFIPLIGLMFGNIVGSVTTFLAYKYDLIQS
MSAWMHGDFSVMMQGRYEMLYVSVPLMAIAYVYANRFTIAGMGEEMATNLGVRYRSIVYTGLLIVAVVSAVEVLTVGTLP
FLGLIVPNIVTMYYGDHLRKVLPLTAIFGALFVLICDVFGRVAIYPYEIPIGLTVGVIGSGAFLYLLVRRTKQYV

Nucleotide


Download         Length: 948 bp        

>NTDB_id=851610 QWV57_RS07030 WP_301101567.1 1377349..1378296(+) (ceuB) [Geobacillus zalihae strain JS1-2]
ATGAAAAAATGGATGGTGCTCCTTGTTGTTTTGGCTGCGGCATCATTGTTTGTCGGTGTGCATGATTTATCGCCTCGCGA
GCTGTTTGCCGGCGACCGTGAGGCGTGGGAAGTGTTTTTGATCAGTCGCTTGCCGAGGCTCATCAGCATTCTGATCGCCG
GGTCAAGCGTGAGCATTTGCGGCTTGATCATGCAGCAGTTGAGCCAAAACCGATTTGTGTCGCCGACGACGGCGGGAACG
ATGGATTGGGCGCGGCTTGGCCTGTTGGTGTCCATGATTGCATTCGCTGCCGCAGGGCCGCTTGTGAAGGCGGCTATTGC
CGTTGTGTTTGCGTTTGCGGGGACGCTGCTGTTTATGACGGTTTTGGATCGTGTGAAGTACAAAGATTCGATCTTTATTC
CGCTCATCGGCTTGATGTTTGGCAATATTGTCGGTTCTGTCACGACGTTTTTGGCTTATAAATATGATTTGATTCAATCG
ATGTCCGCATGGATGCACGGCGATTTTTCCGTTATGATGCAAGGACGTTATGAAATGCTGTATGTGAGCGTTCCGCTCAT
GGCAATCGCTTATGTATACGCCAATCGGTTTACGATCGCCGGCATGGGGGAGGAGATGGCGACGAACTTAGGGGTTCGCT
ACCGTTCGATTGTCTACACTGGTCTCCTCATTGTCGCTGTTGTTTCTGCTGTTGAGGTGTTGACGGTTGGGACGCTGCCG
TTTTTAGGGCTGATCGTTCCGAACATCGTCACGATGTATTATGGGGATCATTTGCGCAAAGTATTGCCGTTGACAGCCAT
ATTTGGCGCTTTGTTTGTGCTAATTTGCGATGTATTTGGCCGAGTCGCCATTTATCCATACGAAATTCCGATCGGCTTGA
CGGTTGGAGTAATCGGAAGCGGCGCCTTTTTATATTTGCTCGTAAGGAGAACGAAGCAGTATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(7-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

48.408

99.683

0.483