Detailed information NTG0851575

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S41_RS01230
• Genome accession: NZ_CP145655
• Coordinates: 251442..252425 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain S1-IND-01-B
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 246442..257425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S41_RS01215 (V6S41_01215)	dppA	247586..249193 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S41_RS01220 (V6S41_01220)	dppB	249500..250519 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S41_RS01225 (V6S41_01225)	dppC	250529..251431 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S41_RS01230 (V6S41_01230)	amiE	251442..252425 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S41_RS01235 (V6S41_01235)	dppF	252422..253435 (+)	1014	WP_000103572.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S41_RS01240 (V6S41_01240)	-	253660..253983 (+)	324	WP_000563102.1	helix-turn-helix transcriptional regulator	-
V6S41_RS01245 (V6S41_01245)	-	253968..254279 (+)	312	WP_001312177.1	HipA N-terminal domain-containing protein	-
V6S41_RS01250 (V6S41_01250)	-	254279..255286 (+)	1008	WP_001262467.1	HipA domain-containing protein	-
V6S41_RS01255 (V6S41_01255)	yhjV	255303..256574 (-)	1272	WP_001545666.1	amino acid permease	-
V6S41_RS01260 (V6S41_01260)	-	257050..257157 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=851575 V6S41_RS01230 WP_001196477.1 251442..252425(+) (amiE) [Escherichia coli strain S1-IND-01-B]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=851575 V6S41_RS01230 WP_001196477.1 251442..252425(+) (amiE) [Escherichia coli strain S1-IND-01-B]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404