Detailed information NTG0851489

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S42_RS00980
• Genome accession: NZ_CP145646
• Coordinates: 219960..220943 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196481.1
• Uniprot ID: -
• Organism: Escherichia coli strain S1-IND-02-A
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 214960..225943

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S42_RS00965 (V6S42_00965)	dppA	216260..217867 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6S42_RS00970 (V6S42_00970)	dppB	218018..219037 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V6S42_RS00975 (V6S42_00975)	dppC	219047..219949 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S42_RS00980 (V6S42_00980)	amiE	219960..220943 (+)	984	WP_001196481.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S42_RS00985 (V6S42_00985)	dppF	220940..221944 (+)	1005	WP_000107033.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S42_RS00990 (V6S42_00990)	yhjV	221974..223245 (-)	1272	WP_022646242.1	aromatic amino acid transport family protein	-
V6S42_RS00995 (V6S42_00995)	-	223721..223828 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S42_RS01000 (V6S42_01000)	-	224203..224310 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S42_RS01005 (V6S42_01005)	-	224687..224794 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S42_RS01010 (V6S42_01010)	-	225171..225278 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35798.31 Da
• Isoelectric Point: 6.5813

>NTDB_id=851489 V6S42_RS00980 WP_001196481.1 219960..220943(+) (amiE) [Escherichia coli strain S1-IND-02-A]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAIAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=851489 V6S42_RS00980 WP_001196481.1 219960..220943(+) (amiE) [Escherichia coli strain S1-IND-02-A]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATAGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407