Detailed information NTG0851470

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: V6S43_RS20275
• Genome accession: NZ_CP145636
• Coordinates: 4130926..4132131 (-)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain S1-ISR-02-A
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4125926..4137131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S43_RS20255 (V6S43_20260)	-	4125988..4127244 (+)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-
V6S43_RS20260 (V6S43_20265)	neuC	4127241..4128416 (+)	1176	WP_000723251.1	UDP-N-acetylglucosamine 2-epimerase	-
V6S43_RS20265 (V6S43_20270)	-	4128409..4129557 (+)	1149	WP_000197086.1	DUF6716 putative glycosyltransferase	-
V6S43_RS20270 (V6S43_20275)	-	4129547..4130776 (+)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
V6S43_RS20275 (V6S43_20280)	kpsS	4130926..4132131 (-)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
V6S43_RS20280 (V6S43_20285)	-	4132166..4134193 (-)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
V6S43_RS20285 (V6S43_20290)	kdsB	4134190..4134930 (-)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
V6S43_RS20290 (V6S43_20295)	-	4134940..4136616 (-)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=851470 V6S43_RS20275 WP_001161835.1 4130926..4132131(-) (kpsS) [Escherichia coli strain S1-ISR-02-A]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=851470 V6S43_RS20275 WP_001161835.1 4130926..4132131(-) (kpsS) [Escherichia coli strain S1-ISR-02-A]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387