Detailed information NTG0851295

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6S45_RS20545
• Genome accession: NZ_CP145630
• Coordinates: 4269567..4270550 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196488.1
• Uniprot ID: -
• Organism: Escherichia coli strain S1-SRL-01-C
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4264567..4275550

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6S45_RS20520 (V6S45_20520)	bcsF	4264728..4264919 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
V6S45_RS20525 (V6S45_20525)	bcsG	4264916..4266595 (+)	1680	WP_000191599.1	cellulose biosynthesis protein BcsG	-
V6S45_RS20530 (V6S45_20530)	ldrD	4266682..4266789 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6S45_RS20535 (V6S45_20535)	yhjV	4267265..4268536 (+)	1272	WP_001316716.1	aromatic amino acid transport family protein	-
V6S45_RS20540 (V6S45_20540)	dppF	4268566..4269570 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6S45_RS20545 (V6S45_20545)	amiE	4269567..4270550 (-)	984	WP_001196488.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6S45_RS20550 (V6S45_20550)	dppC	4270561..4271463 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6S45_RS20555 (V6S45_20555)	dppB	4271473..4272492 (-)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
V6S45_RS20560 (V6S45_20560)	dppA	4272643..4274250 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35859.38 Da
• Isoelectric Point: 6.7585

>NTDB_id=851295 V6S45_RS20545 WP_001196488.1 4269567..4270550(-) (amiE) [Escherichia coli strain S1-SRL-01-C]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLN
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=851295 V6S45_RS20545 WP_001196488.1 4269567..4270550(-) (amiE) [Escherichia coli strain S1-SRL-01-C]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATAAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACC
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGTGTGATGATCGCGATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCACTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTAAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.905	96.33	0.404