Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | FLY89_RS09150 | Genome accession | NZ_AP024415 |
| Coordinates | 1851046..1851426 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain NIPH17_0019 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1846046..1856426
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FLY89_RS09120 (KHAB170019_18210) | lpxK | 1846093..1847103 (+) | 1011 | WP_000050464.1 | tetraacyldisaccharide 4'-kinase | - |
| FLY89_RS09125 (KHAB170019_18220) | kdsB | 1847113..1847874 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| FLY89_RS09130 (KHAB170019_18230) | - | 1847886..1848866 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| FLY89_RS09135 (KHAB170019_18240) | - | 1849073..1849846 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| FLY89_RS09140 (KHAB170019_18250) | - | 1849884..1850492 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| FLY89_RS09145 (KHAB170019_18260) | - | 1850502..1851056 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| FLY89_RS09150 (KHAB170019_18270) | xcpV | 1851046..1851426 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| FLY89_RS09155 (KHAB170019_18280) | xcpW | 1851426..1852127 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| FLY89_RS09160 (KHAB170019_18290) | gspK | 1852127..1853086 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| FLY89_RS09165 (KHAB170019_18300) | - | 1853317..1853913 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| FLY89_RS09170 (KHAB170019_18310) | ung | 1853964..1854677 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| FLY89_RS09175 (KHAB170019_18320) | - | 1854674..1855798 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| FLY89_RS09180 (KHAB170019_18330) | tadA | 1855805..1856308 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=85122 FLY89_RS09150 WP_000836911.1 1851046..1851426(+) (xcpV) [Acinetobacter baumannii strain NIPH17_0019]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=85122 FLY89_RS09150 WP_000836911.1 1851046..1851426(+) (xcpV) [Acinetobacter baumannii strain NIPH17_0019]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |