Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | QWI19_RS12805 | Genome accession | NZ_CP129123 |
| Coordinates | 2479710..2480120 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis strain 6D1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2475076..2500719 | 2479710..2480120 | within | 0 |
Gene organization within MGE regions
Location: 2475076..2500719
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QWI19_RS12780 | yqeF | 2475243..2475974 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| QWI19_RS12785 | cwlH | 2476226..2476978 (-) | 753 | WP_015251672.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| QWI19_RS12790 | yqeD | 2477165..2477791 (+) | 627 | WP_015251671.1 | TVP38/TMEM64 family protein | - |
| QWI19_RS12795 | gnd | 2477810..2478703 (-) | 894 | WP_015251670.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| QWI19_RS12800 | yqeB | 2478955..2479677 (+) | 723 | WP_010886572.1 | hypothetical protein | - |
| QWI19_RS12805 | nucA/comI | 2479710..2480120 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| QWI19_RS12810 | - | 2480316..2480666 (+) | 351 | Protein_2476 | sigma-70 family RNA polymerase sigma factor | - |
| QWI19_RS12815 | - | 2480806..2481276 (+) | 471 | WP_015251668.1 | MarR family transcriptional regulator | - |
| QWI19_RS12820 | - | 2481426..2482838 (+) | 1413 | WP_015251667.1 | MDR family MFS transporter | - |
| QWI19_RS12825 | spoIVCA | 2483025..2484485 (-) | 1461 | WP_235701260.1 | site-specific DNA recombinase SpoIVCA | - |
| QWI19_RS12830 | - | 2484443..2484621 (-) | 179 | Protein_2480 | hypothetical protein | - |
| QWI19_RS12835 | - | 2485265..2486362 (-) | 1098 | WP_032726210.1 | glycosyl hydrolase | - |
| QWI19_RS12845 | - | 2487295..2488422 (-) | 1128 | WP_015251664.1 | Rap family tetratricopeptide repeat protein | - |
| QWI19_RS12855 | - | 2489202..2489876 (+) | 675 | WP_015251663.1 | TraX family protein | - |
| QWI19_RS12860 | - | 2490015..2490149 (+) | 135 | WP_015251662.1 | hypothetical protein | - |
| QWI19_RS12865 | - | 2490260..2490419 (+) | 160 | Protein_2485 | hypothetical protein | - |
| QWI19_RS12870 | - | 2490789..2492555 (+) | 1767 | WP_015251660.1 | T7SS effector LXG polymorphic toxin | - |
| QWI19_RS12875 | - | 2492569..2493033 (+) | 465 | WP_015251659.1 | SMI1/KNR4 family protein | - |
| QWI19_RS12880 | - | 2493236..2493958 (-) | 723 | WP_015251658.1 | NPP1 family protein | - |
| QWI19_RS12885 | - | 2494556..2495119 (-) | 564 | WP_015251657.1 | TetR/AcrR family transcriptional regulator | - |
| QWI19_RS12890 | - | 2495317..2496204 (+) | 888 | WP_015251656.1 | NmrA family NAD(P)-binding protein | - |
| QWI19_RS12895 | - | 2496254..2497222 (-) | 969 | WP_015251655.1 | N-acetylmuramoyl-L-alanine amidase | - |
| QWI19_RS12900 | - | 2497267..2497407 (-) | 141 | Protein_2492 | phage holin family protein | - |
| QWI19_RS12905 | - | 2497434..2497619 (-) | 186 | Protein_2493 | phage terminase large subunit | - |
| QWI19_RS12910 | terS | 2497616..2498386 (-) | 771 | Protein_2494 | phage terminase small subunit | - |
| QWI19_RS12915 | - | 2498568..2498654 (+) | 87 | WP_073991391.1 | YjcZ family sporulation protein | - |
| QWI19_RS12920 | - | 2498695..2498787 (+) | 93 | WP_080019512.1 | YjcZ family sporulation protein | - |
| QWI19_RS12925 | - | 2498973..2499188 (-) | 216 | WP_080019511.1 | CotD family spore coat protein | - |
| QWI19_RS12930 | yqaQ | 2499746..2500155 (-) | 410 | Protein_2498 | sigma-70 family RNA polymerase sigma factor | - |
| QWI19_RS12935 | - | 2500453..2500719 (+) | 267 | WP_029318115.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=851219 QWI19_RS12805 WP_009967785.1 2479710..2480120(-) (nucA/comI) [Bacillus subtilis strain 6D1]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=851219 QWI19_RS12805 WP_009967785.1 2479710..2480120(-) (nucA/comI) [Bacillus subtilis strain 6D1]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCTGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGCTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGAGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTACGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCTGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGCTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGAGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTACGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |